| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605294
Identifier: 86605294
GI number: 86605294
Start: 590947
End: 591267
Strand: Reverse
Name: 86605294
Synonym: CYA_0578
Alternate gene names: NA
Gene position: 591267-590947 (Counterclockwise)
Preceding gene: 86605295
Following gene: 86605293
Centisome position: 20.16
GC content: 52.96
Gene sequence:
>321_bases ATGGAAAAGATGTTGGTTAATATCGTTGAGTACCTGGCTTTGGGAGAACTGGAAAATGTCCTCTGTACTGAGCACCCCCA TCAGCAGGTTTTCCACGATGCCAGGGAGCGGGAAGCGCTGATGCAGCAGATCTTAAACCGGGTTCCTGCTGTTTATATGT GGCTGGCTGCCGATGAGTGTCCCAGCCGCGATCAGCTCAACCCTTCTGAGCTGGAATTGCTCCGCTCGGTAGTGCGGGAG GTGGTCAATCAAAAGCTGCAACAAGCTTCTTTTGGCGTTGATCCCTATGCGGGATCCATGTCGGAAGCCTTCTACGGGTA G
Upstream 100 bases:
>100_bases CAAGAGTCCGAGGCAAAGAGCGGCGAAGGAGGAAAGGAGAAAGTTGCACTTTTTGTTTAATGCCTGTTTTAAGAGCGACG GGGATTTTTAGGAGGGACAA
Downstream 100 bases:
>100_bases AGGGAAGATGGGCTTAGGCTAGACTGCAAGAACGCTACCTTGCCCTGGTATGTTGCCCGTTTACTATTCTGAGACTTTTC TCCGCCACGACGCCGGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MEKMLVNIVEYLALGELENVLCTEHPHQQVFHDAREREALMQQILNRVPAVYMWLAADECPSRDQLNPSELELLRSVVRE VVNQKLQQASFGVDPYAGSMSEAFYG
Sequences:
>Translated_106_residues MEKMLVNIVEYLALGELENVLCTEHPHQQVFHDAREREALMQQILNRVPAVYMWLAADECPSRDQLNPSELELLRSVVRE VVNQKLQQASFGVDPYAGSMSEAFYG >Mature_106_residues MEKMLVNIVEYLALGELENVLCTEHPHQQVFHDAREREALMQQILNRVPAVYMWLAADECPSRDQLNPSELELLRSVVRE VVNQKLQQASFGVDPYAGSMSEAFYG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12136; Mature: 12136
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKMLVNIVEYLALGELENVLCTEHPHQQVFHDAREREALMQQILNRVPAVYMWLAADEC CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PSRDQLNPSELELLRSVVREVVNQKLQQASFGVDPYAGSMSEAFYG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCC >Mature Secondary Structure MEKMLVNIVEYLALGELENVLCTEHPHQQVFHDAREREALMQQILNRVPAVYMWLAADEC CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PSRDQLNPSELELLRSVVREVVNQKLQQASFGVDPYAGSMSEAFYG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA