Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605288

Identifier: 86605288

GI number: 86605288

Start: 585522

End: 586202

Strand: Reverse

Name: 86605288

Synonym: CYA_0572

Alternate gene names: NA

Gene position: 586202-585522 (Counterclockwise)

Preceding gene: 86605289

Following gene: 86605287

Centisome position: 19.99

GC content: 57.86

Gene sequence:

>681_bases
ATGGATGCGGATCTGGAGGCTTGCTGTGAAGCATTTGGCCTGAGGGAAGGGTACCTGCGTCTGCAACAACAACAACTGCG
CTTCTGGGTTATGCTGGCCCTCTGCCTGTTGGTGGTTGCCCTGGTGATCTTTTTGGGGATGCGGGATCCCGGCTATTGGC
TACTGTATACAGTGGCCGTCGTGTTGCTGGCGGTGGTTTTGCTGGGGCTCCTCTGGGCCAGCTTGGAGCTGCAGCAGAGC
CTGCGCCGCATTCGCCAGCGCTGGCAGGAGGCCCACCTCCTAAATAGCCCTCCCAAGATCATGGAGTTTGCCAGCGATCT
CGCCCGCAAGGTAAAAGAGTACAACCGCTGGGTGCAAGAGCTCCAACAATCGCTGGAGGGGGGCCAGTATTGGCGAGATT
TTCGCCAACTGAGCGAGGCCGAGCAGCGGTATATCCAGTCGCTCTTTTTGCAGGTGCGGGCCCAGTTGATCACGGCTTTG
CAGATGTGCAGAGCCTTGATCGAAGACCCACGGGTTCCCGTAGAGCAGTACTTTAACCAGATGGTTGCCCGGGATCAGCA
ACTGCTGGAGCAATTTATCGCCAAAAACTTGACTGCCAACCGCTACGCAGCCATAGCTCGCGAGCTATCTGCCCTGGAAG
CAGATCTGCAAACCCAGCTCAGAGCCCTGGGATCCCGGTGA

Upstream 100 bases:

>100_bases
AGGGCAAATCCTAACGGCCTGGACTTCAACCCAGATTGCGTTGCGAGGGTCTTCGATGATCACTGCCGAACCAATCTCTC
TAGAGGAGTTTCGCCAGATC

Downstream 100 bases:

>100_bases
TAGTCTGGTGTCGATGCTCGGCAGCTTGTTCATGAGAAGCAGAGGCACCGCAACGCTGTACATCCTGCTGGGGCTGGGCC
TGCTGGGGTGCGGGGATCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MDADLEACCEAFGLREGYLRLQQQQLRFWVMLALCLLVVALVIFLGMRDPGYWLLYTVAVVLLAVVLLGLLWASLELQQS
LRRIRQRWQEAHLLNSPPKIMEFASDLARKVKEYNRWVQELQQSLEGGQYWRDFRQLSEAEQRYIQSLFLQVRAQLITAL
QMCRALIEDPRVPVEQYFNQMVARDQQLLEQFIAKNLTANRYAAIARELSALEADLQTQLRALGSR

Sequences:

>Translated_226_residues
MDADLEACCEAFGLREGYLRLQQQQLRFWVMLALCLLVVALVIFLGMRDPGYWLLYTVAVVLLAVVLLGLLWASLELQQS
LRRIRQRWQEAHLLNSPPKIMEFASDLARKVKEYNRWVQELQQSLEGGQYWRDFRQLSEAEQRYIQSLFLQVRAQLITAL
QMCRALIEDPRVPVEQYFNQMVARDQQLLEQFIAKNLTANRYAAIARELSALEADLQTQLRALGSR
>Mature_226_residues
MDADLEACCEAFGLREGYLRLQQQQLRFWVMLALCLLVVALVIFLGMRDPGYWLLYTVAVVLLAVVLLGLLWASLELQQS
LRRIRQRWQEAHLLNSPPKIMEFASDLARKVKEYNRWVQELQQSLEGGQYWRDFRQLSEAEQRYIQSLFLQVRAQLITAL
QMCRALIEDPRVPVEQYFNQMVARDQQLLEQFIAKNLTANRYAAIARELSALEADLQTQLRALGSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26376; Mature: 26376

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDADLEACCEAFGLREGYLRLQQQQLRFWVMLALCLLVVALVIFLGMRDPGYWLLYTVAV
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
VLLAVVLLGLLWASLELQQSLRRIRQRWQEAHLLNSPPKIMEFASDLARKVKEYNRWVQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LQQSLEGGQYWRDFRQLSEAEQRYIQSLFLQVRAQLITALQMCRALIEDPRVPVEQYFNQ
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
MVARDQQLLEQFIAKNLTANRYAAIARELSALEADLQTQLRALGSR
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDADLEACCEAFGLREGYLRLQQQQLRFWVMLALCLLVVALVIFLGMRDPGYWLLYTVAV
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
VLLAVVLLGLLWASLELQQSLRRIRQRWQEAHLLNSPPKIMEFASDLARKVKEYNRWVQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LQQSLEGGQYWRDFRQLSEAEQRYIQSLFLQVRAQLITALQMCRALIEDPRVPVEQYFNQ
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
MVARDQQLLEQFIAKNLTANRYAAIARELSALEADLQTQLRALGSR
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA