| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605267
Identifier: 86605267
GI number: 86605267
Start: 565110
End: 565394
Strand: Reverse
Name: 86605267
Synonym: CYA_0551
Alternate gene names: NA
Gene position: 565394-565110 (Counterclockwise)
Preceding gene: 86605269
Following gene: 86605266
Centisome position: 19.28
GC content: 65.26
Gene sequence:
>285_bases GTGCCAGCGCTGATCCTGGGAGTCGGTTTGTGGTTGGGCCTGACGTTCTTGGCCCAGTTGCTCCCTCTGCTGGAAAAGAG AGGCTCCCGTCGCCCCTCAAGCTGGGATGAGCCCACTCCCTCCCGCCAGCTGCAGCCCACCTCGAGTTGGGATCCCTCCT GCCGCTACTTTTCTCGCTCGCCCTATCTGCCCTGTGCTGTGAACCCCCTGGGCCCCTGTCGCTGCCCCCACTACGTCGCG CGTTGCCAGAGCTCCACCGACCCAGGAGCGGGGTCAACAGGTTAG
Upstream 100 bases:
>100_bases GTTGCGAAACTGTCTGCCAAGGCTGGCCCTCTGCCAACCGGCTGGCCTAGGCTGGTTCTGGTTGGAAGACAAGGCTGTTG GCCGACGGAGGAGGGCAATG
Downstream 100 bases:
>100_bases TCCCCCTGGTCTCGTGCGGGTATCTTACAGAATTCGTGTGTGGATCTAGACAAGAGTGTGACATCCTCTCCCGCTAAGCC CTGACGGGCTGTAGACGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MPALILGVGLWLGLTFLAQLLPLLEKRGSRRPSSWDEPTPSRQLQPTSSWDPSCRYFSRSPYLPCAVNPLGPCRCPHYVA RCQSSTDPGAGSTG
Sequences:
>Translated_94_residues MPALILGVGLWLGLTFLAQLLPLLEKRGSRRPSSWDEPTPSRQLQPTSSWDPSCRYFSRSPYLPCAVNPLGPCRCPHYVA RCQSSTDPGAGSTG >Mature_93_residues PALILGVGLWLGLTFLAQLLPLLEKRGSRRPSSWDEPTPSRQLQPTSSWDPSCRYFSRSPYLPCAVNPLGPCRCPHYVAR CQSSTDPGAGSTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10259; Mature: 10128
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALILGVGLWLGLTFLAQLLPLLEKRGSRRPSSWDEPTPSRQLQPTSSWDPSCRYFSRS CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PYLPCAVNPLGPCRCPHYVARCQSSTDPGAGSTG CCCCEECCCCCCCCCHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PALILGVGLWLGLTFLAQLLPLLEKRGSRRPSSWDEPTPSRQLQPTSSWDPSCRYFSRS CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PYLPCAVNPLGPCRCPHYVARCQSSTDPGAGSTG CCCCEECCCCCCCCCHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA