Click here to switch to the map view.

The map label for this gene is 86605266

Identifier: 86605266

GI number: 86605266

Start: 563304

End: 563780

Strand: Reverse

Name: 86605266

Synonym: CYA_0549

Alternate gene names: NA

Gene position: 563780-563304 (Counterclockwise)

Preceding gene: 86605267

Following gene: 86605265

Centisome position: 19.22

GC content: 51.99

Gene sequence:

>477_bases
TTGGTCGTCGCTGGGCAGGATCCGGTACTCGTGGGTGAGAATCATGAGACGGTTCTAGCATTTAGCGCAACGAGCTACAA
CATAGGCCATCGTTCTGTTTACAGCCTACAAATCCACTTGGTGCTGGTGACAAAGTACCGTCGTCGGGTGATAACTGCTC
CAATGTTGCAGAGGCTGGAAGATATATTTCGAGCGACCTGCCAAAAGTGGCGCTGTTCCTTGGTGGAGTTCAACGGTGAG
GCGGATTATGTGCATCTGTTGGTGAGTTTTCCGCCGGATGTTCAGGTCTCGAAGCTGGTGAACAACCTGAAAACAGTCTC
CAGCCGGTTGATTCGCAAAGAGTTCGCCACAGAGGTGGCACGGTTCTACAGCAAGCCTGTATTTTGGACAGGGGCCTATT
TTGTTGCCTCTTGTGGTGGGGTCACCGTTGAGGAGTTGAAGAAGTATGTCGAGCAGCAGGCAACGCCCAGATTGTGA

Upstream 100 bases:

>100_bases
CAATTGGGCAACGGGTTGCGGTCAGCCAATCCAGTCTCTGCCCCAGAGCGTCGTTCCACTGCCGCCGCAACAATTCCAGC
CACTCGGTCATCAGAGCGGC

Downstream 100 bases:

>100_bases
GACTCAGGGGCATTGAACCCCTTCGTCTCACCGCCTATCCCCCATCCCGCCAAGCTGCGCTGTGGCGGGAGTACCCCGGA
GGTTCTGATGGAAATCCGCC

Product: ISSoc3, orfA transposase

Products: NA

Alternate protein names: Transposase IS; IS Element Transposase; ISSoc3 OrfA Transposase; Transposase-Related Protein; Transposase And Inactivated Derivatives; Transposase Family Protein; Transposase -Family Protein; Transposase TnA; ISSoc3 OrfA Transposase Interruption-N; Transposase OrfA; LOW QUALITY PROTEIN Transposase; Transposase Related Protein; LOW QUALITY PROTEIN ISSoc3 OrfA Transposase; Transposition Helper Protein; IS Element ISTsi3 OrfA-Like Probably Transposase; ISChy9 Transposase OrfA; ISCpe2 Transposase OrfA; ISSoc3 Transposase; Transposase Repeat Family IS; ISSoc10 OrfA Transposase; Transposase ORF A; Transposase OrfA For Insertion Sequence Element

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MVVAGQDPVLVGENHETVLAFSATSYNIGHRSVYSLQIHLVLVTKYRRRVITAPMLQRLEDIFRATCQKWRCSLVEFNGE
ADYVHLLVSFPPDVQVSKLVNNLKTVSSRLIRKEFATEVARFYSKPVFWTGAYFVASCGGVTVEELKKYVEQQATPRL

Sequences:

>Translated_158_residues
MVVAGQDPVLVGENHETVLAFSATSYNIGHRSVYSLQIHLVLVTKYRRRVITAPMLQRLEDIFRATCQKWRCSLVEFNGE
ADYVHLLVSFPPDVQVSKLVNNLKTVSSRLIRKEFATEVARFYSKPVFWTGAYFVASCGGVTVEELKKYVEQQATPRL
>Mature_158_residues
MVVAGQDPVLVGENHETVLAFSATSYNIGHRSVYSLQIHLVLVTKYRRRVITAPMLQRLEDIFRATCQKWRCSLVEFNGE
ADYVHLLVSFPPDVQVSKLVNNLKTVSSRLIRKEFATEVARFYSKPVFWTGAYFVASCGGVTVEELKKYVEQQATPRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17970; Mature: 17970

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVAGQDPVLVGENHETVLAFSATSYNIGHRSVYSLQIHLVLVTKYRRRVITAPMLQRLE
CEECCCCCEEECCCCCEEEEEECCEECCCCCEEEEEEEEEEEEEHHHHHHHHHHHHHHHH
DIFRATCQKWRCSLVEFNGEADYVHLLVSFPPDVQVSKLVNNLKTVSSRLIRKEFATEVA
HHHHHHHHHHHHEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RFYSKPVFWTGAYFVASCGGVTVEELKKYVEQQATPRL
HHHCCCCEEEHHHHHHCCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVVAGQDPVLVGENHETVLAFSATSYNIGHRSVYSLQIHLVLVTKYRRRVITAPMLQRLE
CEECCCCCEEECCCCCEEEEEECCEECCCCCEEEEEEEEEEEEEHHHHHHHHHHHHHHHH
DIFRATCQKWRCSLVEFNGEADYVHLLVSFPPDVQVSKLVNNLKTVSSRLIRKEFATEVA
HHHHHHHHHHHHEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RFYSKPVFWTGAYFVASCGGVTVEELKKYVEQQATPRL
HHHCCCCEEEHHHHHHCCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA