Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605257

Identifier: 86605257

GI number: 86605257

Start: 553736

End: 553993

Strand: Reverse

Name: 86605257

Synonym: CYA_0540

Alternate gene names: NA

Gene position: 553993-553736 (Counterclockwise)

Preceding gene: 86605263

Following gene: 86605254

Centisome position: 18.89

GC content: 56.98

Gene sequence:

>258_bases
ATGAAAAGATACGTTTTCGTCAACCGTTCTCAGCAGGTTCAGGTCATCCGAACAATTCCCGGCCACTGGGAGCGCACCCT
CTTCCCCGGCCAGTATGCCATTTTCGAGGCAGAGCCGGACGACTACCTGGAGGTTTATAGCTGCTGCTGTTCTACCACCA
TTTTGGAAGAGCGCCACCCCTGCCGCCGTTTGTTGGACTCCTCACTGCCTGAGGCTGACCCCCACCTGGACAGGCTGGCA
GATGCAGTGAACGGATGA

Upstream 100 bases:

>100_bases
CGATCCCCGTCTTGCCCGTTGGCTATTGTCGGCTGGGGATCAAGAGTGATAGCCTGGCTTAAAGCCAATAAGTTTTTCTT
AAGGCGATTAAAAAAACGCA

Downstream 100 bases:

>100_bases
ATCAGCTTGGGGATCCCGGCTCCTGAGGCCGAGCCTCGGTTTCCTCGCAGGGCAGCTCGGCAGAGGGGGCATCGGGAGGA
CGGGTGAGGCAACTGCCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MKRYVFVNRSQQVQVIRTIPGHWERTLFPGQYAIFEAEPDDYLEVYSCCCSTTILEERHPCRRLLDSSLPEADPHLDRLA
DAVNG

Sequences:

>Translated_85_residues
MKRYVFVNRSQQVQVIRTIPGHWERTLFPGQYAIFEAEPDDYLEVYSCCCSTTILEERHPCRRLLDSSLPEADPHLDRLA
DAVNG
>Mature_85_residues
MKRYVFVNRSQQVQVIRTIPGHWERTLFPGQYAIFEAEPDDYLEVYSCCCSTTILEERHPCRRLLDSSLPEADPHLDRLA
DAVNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9868; Mature: 9868

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRYVFVNRSQQVQVIRTIPGHWERTLFPGQYAIFEAEPDDYLEVYSCCCSTTILEERHP
CCCEEEECCCCCEEEEECCCCCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCH
CRRLLDSSLPEADPHLDRLADAVNG
HHHHHHCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKRYVFVNRSQQVQVIRTIPGHWERTLFPGQYAIFEAEPDDYLEVYSCCCSTTILEERHP
CCCEEEECCCCCEEEEECCCCCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCH
CRRLLDSSLPEADPHLDRLADAVNG
HHHHHHCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA