Click here to switch to the map view.

The map label for this gene is 86605245

Identifier: 86605245

GI number: 86605245

Start: 543064

End: 544068

Strand: Reverse

Name: 86605245

Synonym: CYA_0527

Alternate gene names: NA

Gene position: 544068-543064 (Counterclockwise)

Preceding gene: 86605250

Following gene: 86605243

Centisome position: 18.55

GC content: 64.38

Gene sequence:

>1005_bases
ATGTCTGGTGTAACTGCAGAGCTCTGGCCCCGGCGGCGCTTTCTGGCCAGTGGAGCTGCTCTAGTGGCAGCAGCAGCGGG
ATCCCGTCGCTCCCACTCCCGGCCCCTGCGCCTGGTGACCAACTGGTATGCCCAAGCGGAACACGGCGGCTTCTACCAGG
CCCTGGCCCTAGGCATCTACGCCGACTATGGCCTGCAGGTGGAAATCCGCATGGGGGGAACGGCGGTTAACGTGTTGCAA
CTGCTGGCCGGGGGAGCGGCAGACTTTGTCCTCGGCGGCAGCCCCGAGGCCCTAGCGGCTCTGCAGTCAGGGATCCCCGT
GCTCACCGTGGCCGCCTTTTTCCAGAAGGATCCCCAGTGTCTTTTGGCCCATCCGGGGGTGGGCATCGAGCGCCTAGAAG
ACCTGCGGGGCAAGCCCATCTGGGTCTCTCCAGGGGCCAACCTCACCTACTGGCCTTTCTTGCGGGCCAAGTTTGGCTTT
ACCGACGAGCAAAAGCGCCCCTACAACTTCAGCCTCACCCCCTTCCTGCTGGACAAATCCTCTGCCCAGCAGGGCTATGT
CACCTCCGAGCCCTTCCGCGTGCGCCAGGAGGGCGGCTTTGATCCGGTCGTCTTCCTGCTGGCCGACTACGGCTATTCCC
CTTATGCTACCACCCTGGAGACCACCCGCCCCTTTGCCGAACGACACCCTGAGGAGGTGCGAAAATTTGTGGCCGCCTCC
ATCCAGGGCTGGCAGAGCTACCTGGAGGATCCCCGCCCCGGCAACCGCCTCATCCGCCAGGACAACCCCAACATGAGCGA
GGCCCTTCTGGCCTATGCCCACCAAGCCCTGCAAGACTACAACCTCCTCACCGGCGGCGACGCCGCCACCCTGGGGATCG
GCGCCATGACCCACCAGCGCTGGCAGACCTATTTTCAGGAAATGGTTGCCCTGGGAATTGTCGAAGCTGGCCTGAATGTC
CGCCAGGCCTACAGCCTCGACTTTCTCCCCGGCCCCACCGCCTGA

Upstream 100 bases:

>100_bases
GGTCCTCAGGGAGAGGGGTTGGGGCCACTTGGGCCAAGCTGAGGCAAAAACCGCCTGCCTGCGAGATACTGAAAGCGTTG
CAGCCTGAGGATCCCTGCCC

Downstream 100 bases:

>100_bases
GGGATCCCACCTCCCTCCATCACCGCCAAGCTCTGCAGCCGCGGCGATCCCTGCATCGCCAGCTCATGGCGCCGGTGCAT
CTGCTCTGTCAGCAGGTAGG

Product: taurine ABC transporter periplasmic substrate-binding protein

Products: NA

Alternate protein names: NMT1/THI5-Like Domain-Containing Protein; Diguanylate Cyclase; NMT1/THI5 Like Domain-Containing Protein; NMT1/THI5 Like Family; Histidine Kinase; ABC Transporter Periplasmic; GGDEF Domain-Containing Protein; Permease Protein Of ABC Transporter; Secreted Protein; Twin-Arginine Translocation Pathway Signal; Nitrate/Sulfonate/Bicarbonate ABC Transporter; PAS Sensor Protein; PAS/PAC Sensor-Containg Diguanylate Cyclase; Two-Component Sensor Histidine Kinase; PAS/PAC Sensor Hybrid Histidine Kinase; ABC Transporter Periplasmic Components; Two Domain Sensory Box Histidine Kinase; NMT1/THI5-Like Protein; Signal Transduction Protein; Diguanylate Cyclase Domain Protein; Diguanylate Cyclase/Phosphodiesterase; Sensory Transduction Histidine Kinase; Pyrimidine Biosynthesis; Nitrate/Sulfonate/Bicarbonate ABC Transporter Permease; Diguanylate Cyclase With PAS/PAC Sensor; NMT1/THI5-Ike Domain-Containing Protein; ABC Transporter Permease; PAS/GGDEF Domain-Containing Protein; PAS/PAC Sensor Signal Transduction Histidine Kinase; Membrane Lipoprotein Lipid Attachment Site; ABC-Type Transporter Periplasmic Component; Sensory Box Histidine Kinase; Diguanylate Cyclase With Extracellular Sensor; Two-Component Sensor Protein; PasGgdef; PAS/PAC Sensor-Containing Diguanylate Cyclase; Lipoprotein; Exported Protein; Multi-Sensor Signal Transduction Histidine Kinase

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MSGVTAELWPRRRFLASGAALVAAAAGSRRSHSRPLRLVTNWYAQAEHGGFYQALALGIYADYGLQVEIRMGGTAVNVLQ
LLAGGAADFVLGGSPEALAALQSGIPVLTVAAFFQKDPQCLLAHPGVGIERLEDLRGKPIWVSPGANLTYWPFLRAKFGF
TDEQKRPYNFSLTPFLLDKSSAQQGYVTSEPFRVRQEGGFDPVVFLLADYGYSPYATTLETTRPFAERHPEEVRKFVAAS
IQGWQSYLEDPRPGNRLIRQDNPNMSEALLAYAHQALQDYNLLTGGDAATLGIGAMTHQRWQTYFQEMVALGIVEAGLNV
RQAYSLDFLPGPTA

Sequences:

>Translated_334_residues
MSGVTAELWPRRRFLASGAALVAAAAGSRRSHSRPLRLVTNWYAQAEHGGFYQALALGIYADYGLQVEIRMGGTAVNVLQ
LLAGGAADFVLGGSPEALAALQSGIPVLTVAAFFQKDPQCLLAHPGVGIERLEDLRGKPIWVSPGANLTYWPFLRAKFGF
TDEQKRPYNFSLTPFLLDKSSAQQGYVTSEPFRVRQEGGFDPVVFLLADYGYSPYATTLETTRPFAERHPEEVRKFVAAS
IQGWQSYLEDPRPGNRLIRQDNPNMSEALLAYAHQALQDYNLLTGGDAATLGIGAMTHQRWQTYFQEMVALGIVEAGLNV
RQAYSLDFLPGPTA
>Mature_333_residues
SGVTAELWPRRRFLASGAALVAAAAGSRRSHSRPLRLVTNWYAQAEHGGFYQALALGIYADYGLQVEIRMGGTAVNVLQL
LAGGAADFVLGGSPEALAALQSGIPVLTVAAFFQKDPQCLLAHPGVGIERLEDLRGKPIWVSPGANLTYWPFLRAKFGFT
DEQKRPYNFSLTPFLLDKSSAQQGYVTSEPFRVRQEGGFDPVVFLLADYGYSPYATTLETTRPFAERHPEEVRKFVAASI
QGWQSYLEDPRPGNRLIRQDNPNMSEALLAYAHQALQDYNLLTGGDAATLGIGAMTHQRWQTYFQEMVALGIVEAGLNVR
QAYSLDFLPGPTA

Specific function: Unknown

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36617; Mature: 36486

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGVTAELWPRRRFLASGAALVAAAAGSRRSHSRPLRLVTNWYAQAEHGGFYQALALGIY
CCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
ADYGLQVEIRMGGTAVNVLQLLAGGAADFVLGGSPEALAALQSGIPVLTVAAFFQKDPQC
CCCCEEEEEEECCHHHHHHHHHHCCCCCEEECCCHHHHHHHHCCCHHHHHHHHHCCCCCE
LLAHPGVGIERLEDLRGKPIWVSPGANLTYWPFLRAKFGFTDEQKRPYNFSLTPFLLDKS
EEECCCCCHHHHHHCCCCCEEECCCCCEEECHHHHHHCCCCCCCCCCCCCCCCEEEECCC
SAQQGYVTSEPFRVRQEGGFDPVVFLLADYGYSPYATTLETTRPFAERHPEEVRKFVAAS
CCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCCCCCHHHHCCCHHHCCHHHHHHHHHHH
IQGWQSYLEDPRPGNRLIRQDNPNMSEALLAYAHQALQDYNLLTGGDAATLGIGAMTHQR
HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHH
WQTYFQEMVALGIVEAGLNVRQAYSLDFLPGPTA
HHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCC
>Mature Secondary Structure 
SGVTAELWPRRRFLASGAALVAAAAGSRRSHSRPLRLVTNWYAQAEHGGFYQALALGIY
CCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
ADYGLQVEIRMGGTAVNVLQLLAGGAADFVLGGSPEALAALQSGIPVLTVAAFFQKDPQC
CCCCEEEEEEECCHHHHHHHHHHCCCCCEEECCCHHHHHHHHCCCHHHHHHHHHCCCCCE
LLAHPGVGIERLEDLRGKPIWVSPGANLTYWPFLRAKFGFTDEQKRPYNFSLTPFLLDKS
EEECCCCCHHHHHHCCCCCEEECCCCCEEECHHHHHHCCCCCCCCCCCCCCCCEEEECCC
SAQQGYVTSEPFRVRQEGGFDPVVFLLADYGYSPYATTLETTRPFAERHPEEVRKFVAAS
CCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCCCCCHHHHCCCHHHCCHHHHHHHHHHH
IQGWQSYLEDPRPGNRLIRQDNPNMSEALLAYAHQALQDYNLLTGGDAATLGIGAMTHQR
HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHH
WQTYFQEMVALGIVEAGLNVRQAYSLDFLPGPTA
HHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA