Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is bchJ

Identifier: 86605242

GI number: 86605242

Start: 540751

End: 541434

Strand: Reverse

Name: bchJ

Synonym: CYA_0525

Alternate gene names: NA

Gene position: 541434-540751 (Counterclockwise)

Preceding gene: 86605243

Following gene: 86605241

Centisome position: 18.46

GC content: 58.48

Gene sequence:

>684_bases
ATGGTTAGCACCACCACTCGATCGGATCCCCGTCCCGCAGTCACCATGCCGGTGGGCCGCGACAAGCACGCTCACTACAG
CTACCGCGATTTCTTCCGCTTTAACCGAGAGCAAGGCACGATTATCGACTGGAATAACACCCAAAACCTGCTGCTTAGCG
AAGACTTCATTGTCGGCCTGCAGGCCGGCCTAGAGCGGGAAGTGGGCGATGCCTCTGCGGCGGTGATGTACACCATCGGC
AAGGAGTGGGGCGTCCGCGATGCCCAGCACTTTTCCCAGTGGTACGAGCGGGAGTACGGGGTTGGGGTCAAGCAGTCCAA
CCTTTTGTTTTTGCTGGAGACCTGGTGGTGGCCCTTTACGGCGCAAGGGTGGGGCAAGTGGGAGGTGGAAACCGAATCCA
AACAAAAAGGGTTCTTGTTCATCAACCTGTTTGACTCGATGGTGGCCCGCACCCTGGGCGACGTGGGCAAACCGGTTTGT
CACCTCTATGCCGGGCTGTTTGCCGGATTTTTCTCTGCCATGACCTCCCGTGAGCTGGCCTGCATCGAGATCCAGTGCTA
CGCAATGGGCGAAACCTACTGCAAGTTTTTGCTGGGCAGCCAAGAGCGCATCGATGCCGCCAATTTCTGGATGAGCGAAG
GGGCCAGCGCCCGTGAGATCGAGCAGCGTTTGCGCCAACTGTGA

Upstream 100 bases:

>100_bases
TAGAGGCTCAATAGATTGAATTTCAACAAGAAGGCAGCCCATCAAAGCTAGGGACTTTTCCGATTACTTTGCCGTCTAGA
TTGCTCCTTAGGAGAAAGCC

Downstream 100 bases:

>100_bases
GGCCTGCCTGTGGCTTTTGCAGTCCCTCTCTTCGGCATTGTGGGGAGGATGCCTATGCTTACTTCCAACCTCAACCCCAA
TCTGGACTTAGGGCAACCGC

Product: bacteriochlorophyll 4-vinyl reductase

Products: NA

Alternate protein names: 4-Vinyl Reductase 4VR; Bacteriochlorophyll 4-Vinyl Reductase

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MVSTTTRSDPRPAVTMPVGRDKHAHYSYRDFFRFNREQGTIIDWNNTQNLLLSEDFIVGLQAGLEREVGDASAAVMYTIG
KEWGVRDAQHFSQWYEREYGVGVKQSNLLFLLETWWWPFTAQGWGKWEVETESKQKGFLFINLFDSMVARTLGDVGKPVC
HLYAGLFAGFFSAMTSRELACIEIQCYAMGETYCKFLLGSQERIDAANFWMSEGASAREIEQRLRQL

Sequences:

>Translated_227_residues
MVSTTTRSDPRPAVTMPVGRDKHAHYSYRDFFRFNREQGTIIDWNNTQNLLLSEDFIVGLQAGLEREVGDASAAVMYTIG
KEWGVRDAQHFSQWYEREYGVGVKQSNLLFLLETWWWPFTAQGWGKWEVETESKQKGFLFINLFDSMVARTLGDVGKPVC
HLYAGLFAGFFSAMTSRELACIEIQCYAMGETYCKFLLGSQERIDAANFWMSEGASAREIEQRLRQL
>Mature_227_residues
MVSTTTRSDPRPAVTMPVGRDKHAHYSYRDFFRFNREQGTIIDWNNTQNLLLSEDFIVGLQAGLEREVGDASAAVMYTIG
KEWGVRDAQHFSQWYEREYGVGVKQSNLLFLLETWWWPFTAQGWGKWEVETESKQKGFLFINLFDSMVARTLGDVGKPVC
HLYAGLFAGFFSAMTSRELACIEIQCYAMGETYCKFLLGSQERIDAANFWMSEGASAREIEQRLRQL

Specific function: Unknown

COG id: COG1719

COG function: function code R; Predicted hydrocarbon binding protein (contains V4R domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26106; Mature: 26106

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSTTTRSDPRPAVTMPVGRDKHAHYSYRDFFRFNREQGTIIDWNNTQNLLLSEDFIVGL
CCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCEEECCCCCCEEEECHHHHHH
QAGLEREVGDASAAVMYTIGKEWGVRDAQHFSQWYEREYGVGVKQSNLLFLLETWWWPFT
HHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEE
AQGWGKWEVETESKQKGFLFINLFDSMVARTLGDVGKPVCHLYAGLFAGFFSAMTSRELA
CCCCCEEEEECCCCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEE
CIEIQCYAMGETYCKFLLGSQERIDAANFWMSEGASAREIEQRLRQL
EEEEEEEECCHHHHHHHHCCHHHCCHHHHHHHCCCCHHHHHHHHHCC
>Mature Secondary Structure
MVSTTTRSDPRPAVTMPVGRDKHAHYSYRDFFRFNREQGTIIDWNNTQNLLLSEDFIVGL
CCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCEEECCCCCCEEEECHHHHHH
QAGLEREVGDASAAVMYTIGKEWGVRDAQHFSQWYEREYGVGVKQSNLLFLLETWWWPFT
HHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEE
AQGWGKWEVETESKQKGFLFINLFDSMVARTLGDVGKPVCHLYAGLFAGFFSAMTSRELA
CCCCCEEEEECCCCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEE
CIEIQCYAMGETYCKFLLGSQERIDAANFWMSEGASAREIEQRLRQL
EEEEEEEECCHHHHHHHHCCHHHCCHHHHHHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA