| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is sbp
Identifier: 86605189
GI number: 86605189
Start: 485108
End: 486127
Strand: Reverse
Name: sbp
Synonym: CYA_0471
Alternate gene names: 86605189
Gene position: 486127-485108 (Counterclockwise)
Preceding gene: 86605190
Following gene: 86605188
Centisome position: 16.58
GC content: 64.22
Gene sequence:
>1020_bases TTGGGGATCCCTTCACCCGTCGCGGTGGCCTGGTGGGGGAGAGCGGGGCGGTGGCTGGCGGTGGGATTCCTTCTGCTGGG GCTAGGTGGCTGTGGGGTGGGATCCCACGGGGAAGTGAGGATTCTTCTGGCTTCTTTTGCGGTGACCCGCGATGCCTACC GCCAGATCATCCCTGCCTTTGAGGCCCATTGGCTGGCCCAGACCGGACAACGGGTGCGGGTGGAAAGCAGCTACGCCGGC TCGGCAACGCAGGCGCGGGCGGTCATCGAGGGGCTGGATGCCGATGTGGTGGCCCTGGCCCTAGGCCTGGATGTGGAGCG CATTGTGGCTGCCGGCCTGATTCGGCCAGGCTGGGAAAGCCGCACCCCCAACCAGGGGATCGTCACCCGCTCGGTGGCGG CCATCGTCACGCGACAGGGCAACCCCCGTGGTATCCGCTCTTGGCTGGATCTGGCTCGGCCCGGCCTGCAGGTGATTACC GCCAACCCCAAAACCTCCGGGGGTGCCCGCTGGAACTTTTTGGCCCTCTGGAGCGCTGTCCCTGAGCCGCAGGCCCTAGC CTTCACTACTCAGGTCTACAAAAACGTCCGCGTCCTGCCGCGGGACTCGCGGGAGGCTACGGATGTCTTTTTCCAAAAAG GGCAGGGGGATGCCCTGCTCACCTACGAACATGAGGTGATCCTGGCGGGCTTGCGCGGCCAGCCCTTGCCCTACGTGGTG CCGGATCCCAACATTTCCATCGACAACCCGGTAGCGGTGGTGGATGCCAACGTAGACCGCAAGGGCACCCGCGCCGTGGC CGAAGCCTTTGTGGACTATCTCTTTACGCCCGAGGCGCAGCGGGCCTTTGCCAAGGTGGGTTTTCGGCCAGTGGAGCCCA CGGTGGCGCAAGAGTTTGCCTGGCGTTACCCTCCTGTTGAGAAACTGGTAACCGTTGCCGACCTAGGCGGCTGGGAGACA ATCCAAAACCGCTTCTTTGCCGATGGAGCTTTGTTTGACCGCATTCAAGCCGAGTTGTAG
Upstream 100 bases:
>100_bases CTCCCCTCGCCTTTTGGGAGAGGGGTTGGGGGTGAGGGACGGAGAAGTGGAGAAGTTTTTGGGGATGGCGGTGAAGATGG AAGGGGCAGCGGGGAAGCCA
Downstream 100 bases:
>100_bases GGAGGCTCCCTTGTTTTGGATTCCCATTCAAGTTATTCTGGGAGCTGTATCAACGGTTTGTTGACAGGTTTACCGTAGAT TAGGTGGGCGTTTAACTTCC
Product: sulfate ABC transporter, sulfate-binding protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MGIPSPVAVAWWGRAGRWLAVGFLLLGLGGCGVGSHGEVRILLASFAVTRDAYRQIIPAFEAHWLAQTGQRVRVESSYAG SATQARAVIEGLDADVVALALGLDVERIVAAGLIRPGWESRTPNQGIVTRSVAAIVTRQGNPRGIRSWLDLARPGLQVIT ANPKTSGGARWNFLALWSAVPEPQALAFTTQVYKNVRVLPRDSREATDVFFQKGQGDALLTYEHEVILAGLRGQPLPYVV PDPNISIDNPVAVVDANVDRKGTRAVAEAFVDYLFTPEAQRAFAKVGFRPVEPTVAQEFAWRYPPVEKLVTVADLGGWET IQNRFFADGALFDRIQAEL
Sequences:
>Translated_339_residues MGIPSPVAVAWWGRAGRWLAVGFLLLGLGGCGVGSHGEVRILLASFAVTRDAYRQIIPAFEAHWLAQTGQRVRVESSYAG SATQARAVIEGLDADVVALALGLDVERIVAAGLIRPGWESRTPNQGIVTRSVAAIVTRQGNPRGIRSWLDLARPGLQVIT ANPKTSGGARWNFLALWSAVPEPQALAFTTQVYKNVRVLPRDSREATDVFFQKGQGDALLTYEHEVILAGLRGQPLPYVV PDPNISIDNPVAVVDANVDRKGTRAVAEAFVDYLFTPEAQRAFAKVGFRPVEPTVAQEFAWRYPPVEKLVTVADLGGWET IQNRFFADGALFDRIQAEL >Mature_338_residues GIPSPVAVAWWGRAGRWLAVGFLLLGLGGCGVGSHGEVRILLASFAVTRDAYRQIIPAFEAHWLAQTGQRVRVESSYAGS ATQARAVIEGLDADVVALALGLDVERIVAAGLIRPGWESRTPNQGIVTRSVAAIVTRQGNPRGIRSWLDLARPGLQVITA NPKTSGGARWNFLALWSAVPEPQALAFTTQVYKNVRVLPRDSREATDVFFQKGQGDALLTYEHEVILAGLRGQPLPYVVP DPNISIDNPVAVVDANVDRKGTRAVAEAFVDYLFTPEAQRAFAKVGFRPVEPTVAQEFAWRYPPVEKLVTVADLGGWETI QNRFFADGALFDRIQAEL
Specific function: This protein specifically binds sulfate and is involved in its transmembrane transport [H]
COG id: COG1613
COG function: function code P; ABC-type sulfate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic sulfate-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1790351, Length=306, Percent_Identity=39.8692810457516, Blast_Score=233, Evalue=2e-62, Organism=Escherichia coli, GI1788765, Length=309, Percent_Identity=33.6569579288026, Blast_Score=183, Evalue=2e-47,
Paralogues:
None
Copy number: 1240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR000957 - InterPro: IPR006311 - InterPro: IPR005669 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 36862; Mature: 36731
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: PS00757 PROK_SULFATE_BIND_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIPSPVAVAWWGRAGRWLAVGFLLLGLGGCGVGSHGEVRILLASFAVTRDAYRQIIPAF CCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHH EAHWLAQTGQRVRVESSYAGSATQARAVIEGLDADVVALALGLDVERIVAAGLIRPGWES HHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCCCCC RTPNQGIVTRSVAAIVTRQGNPRGIRSWLDLARPGLQVITANPKTSGGARWNFLALWSAV CCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEEEECCC PEPQALAFTTQVYKNVRVLPRDSREATDVFFQKGQGDALLTYEHEVILAGLRGQPLPYVV CCCHHHHHHHHHHHCCEECCCCCCHHHHHHHCCCCCCEEEEEECEEEEEECCCCCCCEEC PDPNISIDNPVAVVDANVDRKGTRAVAEAFVDYLFTPEAQRAFAKVGFRPVEPTVAQEFA CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHH WRYPPVEKLVTVADLGGWETIQNRFFADGALFDRIQAEL CCCCCHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCC >Mature Secondary Structure GIPSPVAVAWWGRAGRWLAVGFLLLGLGGCGVGSHGEVRILLASFAVTRDAYRQIIPAF CCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHH EAHWLAQTGQRVRVESSYAGSATQARAVIEGLDADVVALALGLDVERIVAAGLIRPGWES HHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCCCCC RTPNQGIVTRSVAAIVTRQGNPRGIRSWLDLARPGLQVITANPKTSGGARWNFLALWSAV CCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEEEECCC PEPQALAFTTQVYKNVRVLPRDSREATDVFFQKGQGDALLTYEHEVILAGLRGQPLPYVV CCCHHHHHHHHHHHCCEECCCCCCHHHHHHHCCCCCCEEEEEECEEEEEECCCCCCCEEC PDPNISIDNPVAVVDANVDRKGTRAVAEAFVDYLFTPEAQRAFAKVGFRPVEPTVAQEFA CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHH WRYPPVEKLVTVADLGGWETIQNRFFADGALFDRIQAEL CCCCCHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1708375 [H]