Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605123

Identifier: 86605123

GI number: 86605123

Start: 420172

End: 420726

Strand: Reverse

Name: 86605123

Synonym: CYA_0404

Alternate gene names: NA

Gene position: 420726-420172 (Counterclockwise)

Preceding gene: 86605124

Following gene: 86605122

Centisome position: 14.35

GC content: 66.49

Gene sequence:

>555_bases
ATGCCTCTAGGATCCACCCACGATCGCATCACCCTCTGGACAGCTCCCGGCGTCACTTTGGCAGCCGGCCTGTTGGGCAA
CAGCGCTGCCGTAGCTCTGGCCGTGGGATCCGCCTATCTCTTCAGCGGCCTGATGTTTTCCGGGGATCTGGACACTGACT
CTCGCCAGTATCGCCGCTGGCTGTTCCTGCGCTGGATTTGGCTCCCCTACCGCCGCTGCCTGCAACACCGCTCCTTCTGG
TCCCACGGGCCGATCGTCGGCACTGCCCTGCGCGTGCTCTACCTGGGCCTGTGGGTGGCGGGGGTGGGCCTGCCGGGGGC
TTGGCTGGGATCCCGCCTGGGCTGGTGGCAGTGGCGGCCCTGGGCCTGGCGCAACCACCTCTGGCAAGGGTTGCATGCGC
ACGCAGAGACGCTGCTTTGGGTGGGCATGGGGCTGGAGCTGGGTTCGCTGAACCACAGCCTCAGCGATTGCCTGGTCTCC
CGCTGGCGACGTTGGCGCAGACGCCGTCGAAGAAGGGGATCCCCCCTTGCCAGGTATGGGCAAAAGTTAGGCTAG

Upstream 100 bases:

>100_bases
AGGTGTTGGATCGCCTCAATCGAGGGATCCCGGCCTGAGGGCAAGCTTTTTCCTTCTCCTGCGGCTAGACTCAGCCGCAG
CGGAGCGCTGCGCTGGCTTC

Downstream 100 bases:

>100_bases
CCAGAGCCGTCTAAGAGACAACCCCGCTGGCCAGGGATCCCGGCAGCAGCTTGTGGCCCGATCCGGTAAGCTGAGTGGGG
CAGAAGCCCTTTCTTCTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MPLGSTHDRITLWTAPGVTLAAGLLGNSAAVALAVGSAYLFSGLMFSGDLDTDSRQYRRWLFLRWIWLPYRRCLQHRSFW
SHGPIVGTALRVLYLGLWVAGVGLPGAWLGSRLGWWQWRPWAWRNHLWQGLHAHAETLLWVGMGLELGSLNHSLSDCLVS
RWRRWRRRRRRRGSPLARYGQKLG

Sequences:

>Translated_184_residues
MPLGSTHDRITLWTAPGVTLAAGLLGNSAAVALAVGSAYLFSGLMFSGDLDTDSRQYRRWLFLRWIWLPYRRCLQHRSFW
SHGPIVGTALRVLYLGLWVAGVGLPGAWLGSRLGWWQWRPWAWRNHLWQGLHAHAETLLWVGMGLELGSLNHSLSDCLVS
RWRRWRRRRRRRGSPLARYGQKLG
>Mature_183_residues
PLGSTHDRITLWTAPGVTLAAGLLGNSAAVALAVGSAYLFSGLMFSGDLDTDSRQYRRWLFLRWIWLPYRRCLQHRSFWS
HGPIVGTALRVLYLGLWVAGVGLPGAWLGSRLGWWQWRPWAWRNHLWQGLHAHAETLLWVGMGLELGSLNHSLSDCLVSR
WRRWRRRRRRRGSPLARYGQKLG

Specific function: Unknown

COG id: COG2389

COG function: function code R; Uncharacterized metal-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21167; Mature: 21036

Theoretical pI: Translated: 12.23; Mature: 12.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLGSTHDRITLWTAPGVTLAAGLLGNSAAVALAVGSAYLFSGLMFSGDLDTDSRQYRRW
CCCCCCCCEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
LFLRWIWLPYRRCLQHRSFWSHGPIVGTALRVLYLGLWVAGVGLPGAWLGSRLGWWQWRP
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCC
WAWRNHLWQGLHAHAETLLWVGMGLELGSLNHSLSDCLVSRWRRWRRRRRRRGSPLARYG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH
QKLG
HHCC
>Mature Secondary Structure 
PLGSTHDRITLWTAPGVTLAAGLLGNSAAVALAVGSAYLFSGLMFSGDLDTDSRQYRRW
CCCCCCCEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
LFLRWIWLPYRRCLQHRSFWSHGPIVGTALRVLYLGLWVAGVGLPGAWLGSRLGWWQWRP
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCC
WAWRNHLWQGLHAHAETLLWVGMGLELGSLNHSLSDCLVSRWRRWRRRRRRRGSPLARYG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH
QKLG
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA