| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605102
Identifier: 86605102
GI number: 86605102
Start: 398277
End: 398516
Strand: Reverse
Name: 86605102
Synonym: CYA_0382
Alternate gene names: NA
Gene position: 398516-398277 (Counterclockwise)
Preceding gene: 86605104
Following gene: 86605100
Centisome position: 13.59
GC content: 54.58
Gene sequence:
>240_bases ATGTTGATTATCCTTGCCATTGTGATCCTACTGGGGTTCTGGGCGCTGCGCTTAATGGAACAGGCGTTTCAGCGGCAGGA GTTCTCGCGCATGTTGGCGGGAACGCTGGTGGCCGTAGCTGCCGGTGGTGTTTTAACCTGTTACTTCCTGATGAGCGATA TTCTACAGATGCTGTTTCCTCTGCAGGCTCAGTCTCCCCACTCACAGGAGCTCCTCTCCGACCTAAGCTGGCTCGACTAA
Upstream 100 bases:
>100_bases TGGCTGCAGAAGACAGAGAACTCTTTACGCTTTAACCAGGTTTTGTCAATAGCAGTTGAGCGACAGGTTCGTTACAATAG ATTACAGCTTAGATTACGAT
Downstream 100 bases:
>100_bases GCCAGTTGTGCTGCCAGCCAGGCTTGAATACTCCGGATCATTCGTTGGTTAGGAGCCAGTAAGTTTTGATAAAAAAACTG CGCGAAAGCATCGATGGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MLIILAIVILLGFWALRLMEQAFQRQEFSRMLAGTLVAVAAGGVLTCYFLMSDILQMLFPLQAQSPHSQELLSDLSWLD
Sequences:
>Translated_79_residues MLIILAIVILLGFWALRLMEQAFQRQEFSRMLAGTLVAVAAGGVLTCYFLMSDILQMLFPLQAQSPHSQELLSDLSWLD >Mature_79_residues MLIILAIVILLGFWALRLMEQAFQRQEFSRMLAGTLVAVAAGGVLTCYFLMSDILQMLFPLQAQSPHSQELLSDLSWLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8886; Mature: 8886
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIILAIVILLGFWALRLMEQAFQRQEFSRMLAGTLVAVAAGGVLTCYFLMSDILQMLFP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQAQSPHSQELLSDLSWLD HCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MLIILAIVILLGFWALRLMEQAFQRQEFSRMLAGTLVAVAAGGVLTCYFLMSDILQMLFP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQAQSPHSQELLSDLSWLD HCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA