Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605091

Identifier: 86605091

GI number: 86605091

Start: 387549

End: 388073

Strand: Reverse

Name: 86605091

Synonym: CYA_0372

Alternate gene names: NA

Gene position: 388073-387549 (Counterclockwise)

Preceding gene: 86605092

Following gene: 86605086

Centisome position: 13.23

GC content: 63.43

Gene sequence:

>525_bases
ATGCTCGACTCTTTGTTGGATAACATTTACGGCGCTTGGTTTCTGCCGGAGCCCACCTTTCGCTCGCTGCGGCAACAGCC
TGTTCTCTGGCAAGCTTTTGGGGTGGTGGCGCTGCTGAACATTCTCGAGGCTGTGCGTCGTTTCGGGGTAAACCTGCCGA
GCATGGTGCTGGCGCTGCTGGCAGGCTTCCTGGGATGGGTAAGCCTGGCGGCCCTGCTGCAGGCGCTGGCCTTTTGTTTT
GGGCGGGCTGCCCCTTCTTTTGCGTCGCTCCTCTGCCTGACGGGCTTTGCTGGCCTGCCCTGGCTGCTGCTGGGACCTGC
CCAATCCTTGGGCGGAGTGGCCGGATCCCTGTTGGGGTTCGTGGCGCTGTTGTGGTTTGTGGTTTGGCAGGTGCGGGCGG
CAGCGGTGGCGCTGGATCTGGAGTGGTGGCGCCTGGCGGGTCTGATCCCGTTGGCCTTCCTGGGCGGGCTCCTGTCCTTG
AACTGGTTGACCAGCGCCGTTGTGGCTTTGGCTTCTCTGGGCTGA

Upstream 100 bases:

>100_bases
TCAGGGCTTTGCCAAGGACGGGATCGGCATTTGCTTGGCTTTGGAGGAGCCCTCTTGTCGTTGGGCTAGGATAGGAGGGC
AGACCGACTTTTTGCCGGCC

Downstream 100 bases:

>100_bases
AAGGCAATTGCAAAATTGGGAAGAAGCAGCCCGCCGGGCTAGTTGGGCACTCGCTGCAGGTGCGGTTTTTCCTCCGGCAG
GATCGCCCCTTCCACAGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MLDSLLDNIYGAWFLPEPTFRSLRQQPVLWQAFGVVALLNILEAVRRFGVNLPSMVLALLAGFLGWVSLAALLQALAFCF
GRAAPSFASLLCLTGFAGLPWLLLGPAQSLGGVAGSLLGFVALLWFVVWQVRAAAVALDLEWWRLAGLIPLAFLGGLLSL
NWLTSAVVALASLG

Sequences:

>Translated_174_residues
MLDSLLDNIYGAWFLPEPTFRSLRQQPVLWQAFGVVALLNILEAVRRFGVNLPSMVLALLAGFLGWVSLAALLQALAFCF
GRAAPSFASLLCLTGFAGLPWLLLGPAQSLGGVAGSLLGFVALLWFVVWQVRAAAVALDLEWWRLAGLIPLAFLGGLLSL
NWLTSAVVALASLG
>Mature_174_residues
MLDSLLDNIYGAWFLPEPTFRSLRQQPVLWQAFGVVALLNILEAVRRFGVNLPSMVLALLAGFLGWVSLAALLQALAFCF
GRAAPSFASLLCLTGFAGLPWLLLGPAQSLGGVAGSLLGFVALLWFVVWQVRAAAVALDLEWWRLAGLIPLAFLGGLLSL
NWLTSAVVALASLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18578; Mature: 18578

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDSLLDNIYGAWFLPEPTFRSLRQQPVLWQAFGVVALLNILEAVRRFGVNLPSMVLALL
CHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
AGFLGWVSLAALLQALAFCFGRAAPSFASLLCLTGFAGLPWLLLGPAQSLGGVAGSLLGF
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHH
VALLWFVVWQVRAAAVALDLEWWRLAGLIPLAFLGGLLSLNWLTSAVVALASLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLDSLLDNIYGAWFLPEPTFRSLRQQPVLWQAFGVVALLNILEAVRRFGVNLPSMVLALL
CHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
AGFLGWVSLAALLQALAFCFGRAAPSFASLLCLTGFAGLPWLLLGPAQSLGGVAGSLLGF
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHH
VALLWFVVWQVRAAAVALDLEWWRLAGLIPLAFLGGLLSLNWLTSAVVALASLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA