| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86604983
Identifier: 86604983
GI number: 86604983
Start: 267160
End: 268629
Strand: Reverse
Name: 86604983
Synonym: CYA_0262
Alternate gene names: NA
Gene position: 268629-267160 (Counterclockwise)
Preceding gene: 86604984
Following gene: 86604982
Centisome position: 9.16
GC content: 64.01
Gene sequence:
>1470_bases ATGGGCCAAGAGATTGCCTCCCTCAGCTTTGGCGCAGAGGACTTTGCCGAGTTCAAAGCTCGGCTGCAGCAGGAGACGGA TCTGCTGGACCGCTGGCTGGCCGGCCTGCCGGGGCTGGATCCCATTTGCCGGCCTTTTGCCCAGGGATCCCCGGTGGGCG GGTTTGAGCTGGAAGCTTGGCTGGTCACCCCCCAGGGAGATCCGGCCCCGATCAACTCAGCTTACCTGGAGGCCGTCAAC GACCCGCTGGTGGTGCCGGAACTGGCCCGCTTCAACATCGAGCTCAACAGCCGGCCCCAGGTTTTGGTTGCATCCGCTCT GCAGCAGCTCCGCCAAGAGCTGGAACAGAGGTGGGATCGCTGTTGCCGAGTGGCCGAGCAACTGCAGGCAGGGCTGATGA CCATCGGCATTTTACCCACGCTGCAGCAGCAGCAGCTAACCTTGGAGATGATCTCCCCCCGCAAACGCTATCTGGCCCTC AACGAGCAGATCCTGAACCTGCACCGGCGCGAGCAACCCTCCAGGATCCCGCCCCTGGGGCTGACAATCGAAGGGCCTGC CACCCTGCTGCGGGTCACCCACCCAAACGTCATGCTGGAGGCAGCCACCACCTCTTTTCAAATCCATCTGCAGGTGGCCC CCCACCAAGCGGCCCGTTACTTCAACGCTTCCCTGCTCGTGTCGGCCCCCTTGGTAGCGCTGGCGGCCAATTCTCCCTAT CTGTTCGGGCACGACCTATGGGCGGAAACCCGCATCCCTGTGTTTGAGCAGGCGTTGGATGGCCCACCCCCCCTTGCCCC CACCCACCAACCTCGCGTCACCTTTGGGCAAGGCTATGTGCAAGAGTCCCTGATGGAGTTGTTCTGGGAAAATCTACGCT GCTACCCGGTGGTGCTGCCGCAAACGTTGGCCGCCTCTCCCTGGGAGCTGGCCCATCTGCGCCTCCACAACGGCACCATC TGGCGCTGGAACCGCCCTCTGGTGGGGGTGGATCCCTATCCCCATCTGCGCATCGAACAGCGGGTGGCCGCAGCAGGCCC CACCCTGCCGGACATGATCGCCAATGCAGCCTTCTACTTTGGCCTGGTGCAAGCCCTGGGAGCCCGACCCCTTCCCCCGG AGCAGGAGCTGAGCTTTGCCCAGTGCCGCGCCAATTTCTACGCGGCCGCCCGCTTCGGCCTCGAGGCCCCCATCACTTGG CTCAACGGTTGGCAGGGATCCCTGCGCCAATTGCTGCTGCAAGAGCTGATCCCGCAAGCAGAGGCGGGCTTGGCGCAACT GGACTTGGCCCCCCAGGATATCCAGGAGTATCTGGGCATTCTCCGCGCCCGGGTAGAGTCGGGGCAGAATGGGGCCACCT GGCAGCGCCGCTACGTGGCTCGGCATGGTAAAGATATGCAACAATTGACCTGTGCCTACTGGGAACGGCAGCGGCAAGGC CGGCCGGTACACACCTGGGATCTCGGCTAG
Upstream 100 bases:
>100_bases GATCCCTGGACGATGCCGGCCCATATTTTTCTCGTCGAAAGCTGAAGCCCGATACCAGCAGTGCAGTGATCTCATCCACG AAAGCCGCGGAGTTGTCTCG
Downstream 100 bases:
>100_bases GGAAGCGCTCTCCCTGTATGGCAGGGGAGACAGATCACCGCCTGGGCATGCCTGTATCGGAAGGGATGCCTTCTCAAAGG GCAGGGCGACGACCCAAGCC
Product: glutamate-cysteine ligase family 2 protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 489; Mature: 488
Protein sequence:
>489_residues MGQEIASLSFGAEDFAEFKARLQQETDLLDRWLAGLPGLDPICRPFAQGSPVGGFELEAWLVTPQGDPAPINSAYLEAVN DPLVVPELARFNIELNSRPQVLVASALQQLRQELEQRWDRCCRVAEQLQAGLMTIGILPTLQQQQLTLEMISPRKRYLAL NEQILNLHRREQPSRIPPLGLTIEGPATLLRVTHPNVMLEAATTSFQIHLQVAPHQAARYFNASLLVSAPLVALAANSPY LFGHDLWAETRIPVFEQALDGPPPLAPTHQPRVTFGQGYVQESLMELFWENLRCYPVVLPQTLAASPWELAHLRLHNGTI WRWNRPLVGVDPYPHLRIEQRVAAAGPTLPDMIANAAFYFGLVQALGARPLPPEQELSFAQCRANFYAAARFGLEAPITW LNGWQGSLRQLLLQELIPQAEAGLAQLDLAPQDIQEYLGILRARVESGQNGATWQRRYVARHGKDMQQLTCAYWERQRQG RPVHTWDLG
Sequences:
>Translated_489_residues MGQEIASLSFGAEDFAEFKARLQQETDLLDRWLAGLPGLDPICRPFAQGSPVGGFELEAWLVTPQGDPAPINSAYLEAVN DPLVVPELARFNIELNSRPQVLVASALQQLRQELEQRWDRCCRVAEQLQAGLMTIGILPTLQQQQLTLEMISPRKRYLAL NEQILNLHRREQPSRIPPLGLTIEGPATLLRVTHPNVMLEAATTSFQIHLQVAPHQAARYFNASLLVSAPLVALAANSPY LFGHDLWAETRIPVFEQALDGPPPLAPTHQPRVTFGQGYVQESLMELFWENLRCYPVVLPQTLAASPWELAHLRLHNGTI WRWNRPLVGVDPYPHLRIEQRVAAAGPTLPDMIANAAFYFGLVQALGARPLPPEQELSFAQCRANFYAAARFGLEAPITW LNGWQGSLRQLLLQELIPQAEAGLAQLDLAPQDIQEYLGILRARVESGQNGATWQRRYVARHGKDMQQLTCAYWERQRQG RPVHTWDLG >Mature_488_residues GQEIASLSFGAEDFAEFKARLQQETDLLDRWLAGLPGLDPICRPFAQGSPVGGFELEAWLVTPQGDPAPINSAYLEAVND PLVVPELARFNIELNSRPQVLVASALQQLRQELEQRWDRCCRVAEQLQAGLMTIGILPTLQQQQLTLEMISPRKRYLALN EQILNLHRREQPSRIPPLGLTIEGPATLLRVTHPNVMLEAATTSFQIHLQVAPHQAARYFNASLLVSAPLVALAANSPYL FGHDLWAETRIPVFEQALDGPPPLAPTHQPRVTFGQGYVQESLMELFWENLRCYPVVLPQTLAASPWELAHLRLHNGTIW RWNRPLVGVDPYPHLRIEQRVAAAGPTLPDMIANAAFYFGLVQALGARPLPPEQELSFAQCRANFYAAARFGLEAPITWL NGWQGSLRQLLLQELIPQAEAGLAQLDLAPQDIQEYLGILRARVESGQNGATWQRRYVARHGKDMQQLTCAYWERQRQGR PVHTWDLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54858; Mature: 54726
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQEIASLSFGAEDFAEFKARLQQETDLLDRWLAGLPGLDPICRPFAQGSPVGGFELEAW CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEEEE LVTPQGDPAPINSAYLEAVNDPLVVPELARFNIELNSRPQVLVASALQQLRQELEQRWDR EECCCCCCCCCCHHHHHHCCCCCCCCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHH CCRVAEQLQAGLMTIGILPTLQQQQLTLEMISPRKRYLALNEQILNLHRREQPSRIPPLG HHHHHHHHHHHHHHECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCC LTIEGPATLLRVTHPNVMLEAATTSFQIHLQVAPHQAARYFNASLLVSAPLVALAANSPY EEECCCEEEEEEECCCEEEEEECCEEEEEEEECCHHHHHHHCCHHHHHCCCCEEECCCCE LFGHDLWAETRIPVFEQALDGPPPLAPTHQPRVTFGQGYVQESLMELFWENLRCYPVVLP EEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHCCCEEEEECC QTLAASPWELAHLRLHNGTIWRWNRPLVGVDPYPHLRIEQRVAAAGPTLPDMIANAAFYF HHHCCCCCCEEEEEEECCEEEEECCCEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH GLVQALGARPLPPEQELSFAQCRANFYAAARFGLEAPITWLNGWQGSLRQLLLQELIPQA HHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHCCHH EAGLAQLDLAPQDIQEYLGILRARVESGQNGATWQRRYVARHGKDMQQLTCAYWERQRQG HCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCC RPVHTWDLG CCCEECCCC >Mature Secondary Structure GQEIASLSFGAEDFAEFKARLQQETDLLDRWLAGLPGLDPICRPFAQGSPVGGFELEAW CCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEEEE LVTPQGDPAPINSAYLEAVNDPLVVPELARFNIELNSRPQVLVASALQQLRQELEQRWDR EECCCCCCCCCCHHHHHHCCCCCCCCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHH CCRVAEQLQAGLMTIGILPTLQQQQLTLEMISPRKRYLALNEQILNLHRREQPSRIPPLG HHHHHHHHHHHHHHECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCC LTIEGPATLLRVTHPNVMLEAATTSFQIHLQVAPHQAARYFNASLLVSAPLVALAANSPY EEECCCEEEEEEECCCEEEEEECCEEEEEEEECCHHHHHHHCCHHHHHCCCCEEECCCCE LFGHDLWAETRIPVFEQALDGPPPLAPTHQPRVTFGQGYVQESLMELFWENLRCYPVVLP EEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHCCCEEEEECC QTLAASPWELAHLRLHNGTIWRWNRPLVGVDPYPHLRIEQRVAAAGPTLPDMIANAAFYF HHHCCCCCCEEEEEEECCEEEEECCCEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH GLVQALGARPLPPEQELSFAQCRANFYAAARFGLEAPITWLNGWQGSLRQLLLQELIPQA HHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHCCHH EAGLAQLDLAPQDIQEYLGILRARVESGQNGATWQRRYVARHGKDMQQLTCAYWERQRQG HCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCC RPVHTWDLG CCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA