| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86604982
Identifier: 86604982
GI number: 86604982
Start: 265865
End: 266866
Strand: Reverse
Name: 86604982
Synonym: CYA_0261
Alternate gene names: NA
Gene position: 266866-265865 (Counterclockwise)
Preceding gene: 86604983
Following gene: 86604981
Centisome position: 9.1
GC content: 62.38
Gene sequence:
>1002_bases ATGCTCACCGTTCTCGACCACCTGCCGGATCAACTCCTGGATCTAGAGGCCCATCAGCTGGAGGATCGCTTGGGCGGGCC GACCCTTATCCATCTGGCGGGACGGCGGGATCCCCCCCTGTTTGTATCCGTCCTGCTGCACGGCAACGAGGTCACCGGCT GGCAGGCGGTGCAACAGCTTCTGCGCCGCTACACCCGGCGGGAACTGCCCCGTTCTCTGTCTCTCTTCATCGGCAATGTA CGGGCTGCTCGCTATGGGCAGCGGCGCCTGGACGGCCAGCCAGACTACAACCGCATTTGGGTCCCCGGCTCCACCCCCGA GCATGCCATGGCCGAGGCGGTTTTGCGGCAGATGCGGCAACGCGGCGTCTTTGCCAGCGTTGACATCCACAACAACACGG GCACCAACCCCCATTACGCCTGTGTCAATTACCTAGATCCTTCCACCTTGCACCTGGCCACCTTGTTTGGTCGCACTGTC CTCTACTTCAGGCGGCCAGAAGGCGTGCAGAGCATGGCCTTTGGGCGCTTCTGCCCGGCGGTAACCCTGGAATGTGGCAA GCCGGATCAGCCCCACGGCACCCAACATGCCTGCGAATTTCTGGAAGCCTGCCTGCACCTGTCGGCGCTGCCGCAACGCC CCGTCCTCAGCCAGGATATCGACCTGTTCCACAGCGTCGCCATCGTCAAGATCCCAGACGAGGTAAGCTTCGGCTTTGGG GAAGAGGCGGGCGACCCGCACCTGCGCTTTCCCCCCGATTTGGATCTCCTCAATTTTCGGGAGCTCCCTCCCCACACCCG CATCGGCTGGACGAACAACGGCTTCCACCTGGAGGTACAAGACGAGCAGGGCCAAGATGTGGCGGATCGCTTCTTCTATG CCCAAGATGGCGAAATTCGCACCCGCGTGCCCATCATGCCCGGCATGCTCACCCTCAACAGCCGCATCATCCGCCAAGAT TGCCTCTGCTACTTGATGGAGCGCTACTCCCTGGCTGGCTAA
Upstream 100 bases:
>100_bases GGGGGTGAGGGCTCTGAATTAGAGAGAGGGCTCGATTTCCCGGATCCCCTCTGCCCTTGAGCAGCCAAAAGGTTTGCGTT GAGGTGCTTGCCCAACCCTT
Downstream 100 bases:
>100_bases ACTTCCGCGCTACTCTCGGGCGCAGTCTACGTGGCGCCAGCGACGGACGTTCTCGCCTAGCTCGATTGGCCCATCCCCGC AAGAGGCAACAAGGCAAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MLTVLDHLPDQLLDLEAHQLEDRLGGPTLIHLAGRRDPPLFVSVLLHGNEVTGWQAVQQLLRRYTRRELPRSLSLFIGNV RAARYGQRRLDGQPDYNRIWVPGSTPEHAMAEAVLRQMRQRGVFASVDIHNNTGTNPHYACVNYLDPSTLHLATLFGRTV LYFRRPEGVQSMAFGRFCPAVTLECGKPDQPHGTQHACEFLEACLHLSALPQRPVLSQDIDLFHSVAIVKIPDEVSFGFG EEAGDPHLRFPPDLDLLNFRELPPHTRIGWTNNGFHLEVQDEQGQDVADRFFYAQDGEIRTRVPIMPGMLTLNSRIIRQD CLCYLMERYSLAG
Sequences:
>Translated_333_residues MLTVLDHLPDQLLDLEAHQLEDRLGGPTLIHLAGRRDPPLFVSVLLHGNEVTGWQAVQQLLRRYTRRELPRSLSLFIGNV RAARYGQRRLDGQPDYNRIWVPGSTPEHAMAEAVLRQMRQRGVFASVDIHNNTGTNPHYACVNYLDPSTLHLATLFGRTV LYFRRPEGVQSMAFGRFCPAVTLECGKPDQPHGTQHACEFLEACLHLSALPQRPVLSQDIDLFHSVAIVKIPDEVSFGFG EEAGDPHLRFPPDLDLLNFRELPPHTRIGWTNNGFHLEVQDEQGQDVADRFFYAQDGEIRTRVPIMPGMLTLNSRIIRQD CLCYLMERYSLAG >Mature_333_residues MLTVLDHLPDQLLDLEAHQLEDRLGGPTLIHLAGRRDPPLFVSVLLHGNEVTGWQAVQQLLRRYTRRELPRSLSLFIGNV RAARYGQRRLDGQPDYNRIWVPGSTPEHAMAEAVLRQMRQRGVFASVDIHNNTGTNPHYACVNYLDPSTLHLATLFGRTV LYFRRPEGVQSMAFGRFCPAVTLECGKPDQPHGTQHACEFLEACLHLSALPQRPVLSQDIDLFHSVAIVKIPDEVSFGFG EEAGDPHLRFPPDLDLLNFRELPPHTRIGWTNNGFHLEVQDEQGQDVADRFFYAQDGEIRTRVPIMPGMLTLNSRIIRQD CLCYLMERYSLAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37776; Mature: 37776
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTVLDHLPDQLLDLEAHQLEDRLGGPTLIHLAGRRDPPLFVSVLLHGNEVTGWQAVQQL CCCHHHHCCHHHHCCHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHH LRRYTRRELPRSLSLFIGNVRAARYGQRRLDGQPDYNRIWVPGSTPEHAMAEAVLRQMRQ HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHH RGVFASVDIHNNTGTNPHYACVNYLDPSTLHLATLFGRTVLYFRRPEGVQSMAFGRFCPA CCCEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHCEEEEEECCCCHHHHHHHHCCCE VTLECGKPDQPHGTQHACEFLEACLHLSALPQRPVLSQDIDLFHSVAIVKIPDEVSFGFG EEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCEEEEECCCCCCCCCC EEAGDPHLRFPPDLDLLNFRELPPHTRIGWTNNGFHLEVQDEQGQDVADRFFYAQDGEIR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHEECCCCCCE TRVPIMPGMLTLNSRIIRQDCLCYLMERYSLAG EECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLTVLDHLPDQLLDLEAHQLEDRLGGPTLIHLAGRRDPPLFVSVLLHGNEVTGWQAVQQL CCCHHHHCCHHHHCCHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHH LRRYTRRELPRSLSLFIGNVRAARYGQRRLDGQPDYNRIWVPGSTPEHAMAEAVLRQMRQ HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHH RGVFASVDIHNNTGTNPHYACVNYLDPSTLHLATLFGRTVLYFRRPEGVQSMAFGRFCPA CCCEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHCEEEEEECCCCHHHHHHHHCCCE VTLECGKPDQPHGTQHACEFLEACLHLSALPQRPVLSQDIDLFHSVAIVKIPDEVSFGFG EEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCEEEEECCCCCCCCCC EEAGDPHLRFPPDLDLLNFRELPPHTRIGWTNNGFHLEVQDEQGQDVADRFFYAQDGEIR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHEECCCCCCE TRVPIMPGMLTLNSRIIRQDCLCYLMERYSLAG EECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA