| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is phoU
Identifier: 86604908
GI number: 86604908
Start: 181936
End: 182577
Strand: Reverse
Name: phoU
Synonym: CYA_0182
Alternate gene names: 86604908
Gene position: 182577-181936 (Counterclockwise)
Preceding gene: 86604911
Following gene: 86604907
Centisome position: 6.23
GC content: 58.57
Gene sequence:
>642_bases ATGGGGCAAGCCGAGCTACAACTTCACATCAAACGGGTACAGCAGGACGTGCTGCGCATGGGGGCGCTGGTGGAAAAGTC GGTGGTCTTGGCCCAGCAGGCCCTGTTTGAACAGAACTTGGCCGCCGCCGAACAGGTGATCGCCCAAGACAAGCAAATTG ACCGCTTTTATCGCCAAATCGAGAAAGACTGTATTAATTTGATTGCCTTGCGCTCCCCGGTGGCGCGGGATCTGCGCTGG ATCAGTACCCTGATGCAACTGGTACGCGATCTGGAGCGGATTGGCGACTACGCCAAAGATTTGGCCGAAGTGGCCCTGCG CTTGGTCATGTACCCGCCGCCCCCGGAGCTGGGCCGCATTCGCCTGACGATGCAGCGCTGCCAGAAAATGCTCAGCCACA GCCTGGCCGCCCTGACGGAGTTGGATGCCGAGCTGGGCCGACAACTGAAGCGGGAAGACGACGCCGTTGATGAAGACTAC ACCAACCTTTACAATACGTTGGCGCAGCAGTCTGACATCAAGGGATCGATCGAGCCTATCCTGTTGATGTTGCTGGCGAT CCGCTACCTAGAGCGTCTGGCCGACCACTGCACCAACATCGGTCAGCGAGTAGCCTTTATCGTCACCGGCCACCGCGACT AA
Upstream 100 bases:
>100_bases CTATTCCAGGCGAAGTTTGCCATGATTGAGATCAACTGGCTCTGGTGATCCAAAACGACTGCAGACATTTCCCCCCTGCC CACATTCATGGGAGAAAGCC
Downstream 100 bases:
>100_bases TCCAAGTGGCTGCGCCTGTCCCTTAATCGCGGCTCTCATTCCCCCTGGATACCCGCAATGGATTTCTCTCGGATTTTTCA TCACTTTTTCTCTCAACCTG
Product: phosphate transport system regulatory protein PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MGQAELQLHIKRVQQDVLRMGALVEKSVVLAQQALFEQNLAAAEQVIAQDKQIDRFYRQIEKDCINLIALRSPVARDLRW ISTLMQLVRDLERIGDYAKDLAEVALRLVMYPPPPELGRIRLTMQRCQKMLSHSLAALTELDAELGRQLKREDDAVDEDY TNLYNTLAQQSDIKGSIEPILLMLLAIRYLERLADHCTNIGQRVAFIVTGHRD
Sequences:
>Translated_213_residues MGQAELQLHIKRVQQDVLRMGALVEKSVVLAQQALFEQNLAAAEQVIAQDKQIDRFYRQIEKDCINLIALRSPVARDLRW ISTLMQLVRDLERIGDYAKDLAEVALRLVMYPPPPELGRIRLTMQRCQKMLSHSLAALTELDAELGRQLKREDDAVDEDY TNLYNTLAQQSDIKGSIEPILLMLLAIRYLERLADHCTNIGQRVAFIVTGHRD >Mature_212_residues GQAELQLHIKRVQQDVLRMGALVEKSVVLAQQALFEQNLAAAEQVIAQDKQIDRFYRQIEKDCINLIALRSPVARDLRWI STLMQLVRDLERIGDYAKDLAEVALRLVMYPPPPELGRIRLTMQRCQKMLSHSLAALTELDAELGRQLKREDDAVDEDYT NLYNTLAQQSDIKGSIEPILLMLLAIRYLERLADHCTNIGQRVAFIVTGHRD
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=210, Percent_Identity=30, Blast_Score=93, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 24377; Mature: 24246
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQAELQLHIKRVQQDVLRMGALVEKSVVLAQQALFEQNLAAAEQVIAQDKQIDRFYRQI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKDCINLIALRSPVARDLRWISTLMQLVRDLERIGDYAKDLAEVALRLVMYPPPPELGRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH RLTMQRCQKMLSHSLAALTELDAELGRQLKREDDAVDEDYTNLYNTLAQQSDIKGSIEPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHH LLMLLAIRYLERLADHCTNIGQRVAFIVTGHRD HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC >Mature Secondary Structure GQAELQLHIKRVQQDVLRMGALVEKSVVLAQQALFEQNLAAAEQVIAQDKQIDRFYRQI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKDCINLIALRSPVARDLRWISTLMQLVRDLERIGDYAKDLAEVALRLVMYPPPPELGRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH RLTMQRCQKMLSHSLAALTELDAELGRQLKREDDAVDEDYTNLYNTLAQQSDIKGSIEPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHH LLMLLAIRYLERLADHCTNIGQRVAFIVTGHRD HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]