| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
Click here to switch to the map view.
The map label for this gene is zam
Identifier: 86604907
GI number: 86604907
Start: 179593
End: 181878
Strand: Reverse
Name: zam
Synonym: CYA_0181
Alternate gene names: 86604907
Gene position: 181878-179593 (Counterclockwise)
Preceding gene: 86604908
Following gene: 86604906
Centisome position: 6.2
GC content: 62.16
Gene sequence:
>2286_bases ATGGATTTCTCTCGGATTTTTCATCACTTTTTCTCTCAACCTGCCGAGCAATGGACCGATAAAGACGCGCTGCTTGCCCT CCTGCCAGCCTCAGACCCAGAAGCGCCGGAAATGCTCGAGATTGCCCTCGATGGTCTGGTACGGGCGGGGTTTCTCGAAC GGACAGGGGATCCGCCCCGCTATCGGCGTAAGCCGGATGAATCCTTGGTGGTGGGGCGTTTGCGCTGTTCCAGCAAGGGT TTTTGCTTTGCCGTGCGGGATGAACCGGGGGCAGAGGATGTGTATATCCACGGCAGCAACCTTAGCGGCGCTTGGAACGG CGACCAAGTGATAGCCCGGATTACCAAAGAAGGCAATCGCCGCCGCAGCCCAGAGGGAGAGGTGGTAGCTGTTGTGGAAC GGGCCAATCCCACTCTCGTGGGCCGCCTCAAACAGACGGAAGAGGGTTTCCGGGTGGTGCCTCTGGATGACCGGCTGCTG TTCGAGCTGGCCTTGACCGAGGGATCCCCTGCCGAGCTGGCGGAAGGTCGGGTGGCCTATGTGGAAGTGGAGCGCTACCC GCTGGGCAACTTGCCCCCCGTGGGCACGATTCGCAAGATCTTGGGCAATGGCCCGGAGGCGTCCATCGATGCGGATCTGG TCTGCTGCAAGTACGACCTGCCCCAGGAGTTTCCCCCGGCGGTGCTGGAGGCTGCGGCAACTCTGCCCAAAAAGCTGAGC CGCTCCGACCAAAAGAACCGTCGCGATCTGCGGGACTGGTTTTGCGTCACGCTGGAGCCGCTGGACTTGCAGCACCCCCA CGGCCTCGAGCCCAACGTGGCCGTCTCCCTGCAGCGGCAAGAAGAGGGCCACTGGCTGCTGGGGGTGCACATTGCCGATG TAGCCCACTGGCTGGATCCGGATCACCCCCTGGAGCGGGAGGCGCAGCGGCGCACCGCCACGGTTTACCTGGATAGCGTG GTGCTGCCCCTTTTCCCGCCGGAAGTGCACAGCCGCCTGGCTCTGTTGCCGCAGCAGGAGCGTCTGGCCTACTCGCTGCT GCTGACCATTGACCCCGAAGGGGTGGTGCGCAACTTCGAGATCCACCCCAGCCTGGTGCAATCGCGGGCTCACCTGTCCT ATGGTCAGGTGCAGGCTCTCTTGGCCACCGCCGCGGATCTGGGCCCCGATGAGGAGGTGCCGGAGTTGATGGCCCTGCTG CAAAACCTGCTCCGTCTCAGCCAAGTCCTGCGAGTCAAGCGCCACCAGGCAGGCGGGTTCGATCTGCCCCTGTTGGATTT GCTCACCCCCTACTCTGCCGATGAAAGCGGCTATGGGCCCCTGCTGGTCAGCGATCGCCTCGGCGCCCACGCCCTGATGA CCGAAATTCTGCTGCTGGCCAACCAAATCCTGGGCCACCATTTGCGCCGGCTGGGGATCCCTTCGTTGGCCCGCGTGCAG AAGCCCCCCACCGCTGAGGCCCTGCAGAACTTTTTGCGTCTGGCCAACGCCATGAAGCTGGATCTGAACTTGCAGGATCC AGAAGCTGTGACGTTAGCCGATTGGCAGCGGATCTGTGCCCGCATCACCGCCCCCGATGTCTTGGCCGCAGGGACTAGCC CAGCCTTGGTGGCCCAGTTGTTGGCTACTCTGCCCCCCGTCGAGTATTGCCTGCAGCCGCTGCAGGAGCCGCTCGGCCAT TTTGGCCTTGGCCTCAAAGAGCCCTACGCCTCTTTTACTGCCCCTTTGCGCCGCTATGCCGATTTGCTGAATTTGCGGGC TCTGCACCTAGCCTTGAGCAAAGGACGGGATCGCCGCAGCCCGCGCTCCAAAACCGTGGTGGATCTGCATGGCCCCGGCA GCTACGACCAAATTGATTGGCAGGTGCTGCCGCCAAAAGTGCATGAGGAGTGGCAGGCCTTTCTCCAAGCGCAACTGCCC AAAATCCAGGCGGGATATCAGCTCCATCAACAGGCAGAGCGGGAGCTGATGGGCTTGAAGCGGTGCGAGTTCATGCAAAA ACACCTGGGGGAGACGTTCCCCGGCCTGATCGTCAGCGTCCAGAACTACGGCTTTTTTGTGCAGGTGGATCCCATCTTGG CGGAAGGCTTGGTGCGGGTCAGCACCCTGAAAAACGACTGGTACGAATACCGCAGCCGCCAGCAGGCCCTGGTAGGGCGC AAAAGCCGGCGCCAGTTCCGCCTGGGGGATCGGGTGGAGGTGCAGATTAAAAACGTAGACTACTACCGCCAACAAATTGA CCTGGCGGTGATCGGCGAGGGACGGCCCTACGAAGAAGAGGAATAA
Upstream 100 bases:
>100_bases CGGTCAGCGAGTAGCCTTTATCGTCACCGGCCACCGCGACTAATCCAAGTGGCTGCGCCTGTCCCTTAATCGCGGCTCTC ATTCCCCCTGGATACCCGCA
Downstream 100 bases:
>100_bases GGCGGGGATCCGTCCATCAATCGCGGTAGGAGGGGACGGTTGTTGCGAACTCCGGCTTTGGCAAAATAGGCGATACCTGG ATCGTAGGATGCCAGCAGCG
Product: acetazolamide conferring resistance protein Zam
Products: tetrahydrofolate; N-formylmethionyl-tRNA(fMet)
Alternate protein names: NA
Number of amino acids: Translated: 761; Mature: 761
Protein sequence:
>761_residues MDFSRIFHHFFSQPAEQWTDKDALLALLPASDPEAPEMLEIALDGLVRAGFLERTGDPPRYRRKPDESLVVGRLRCSSKG FCFAVRDEPGAEDVYIHGSNLSGAWNGDQVIARITKEGNRRRSPEGEVVAVVERANPTLVGRLKQTEEGFRVVPLDDRLL FELALTEGSPAELAEGRVAYVEVERYPLGNLPPVGTIRKILGNGPEASIDADLVCCKYDLPQEFPPAVLEAAATLPKKLS RSDQKNRRDLRDWFCVTLEPLDLQHPHGLEPNVAVSLQRQEEGHWLLGVHIADVAHWLDPDHPLEREAQRRTATVYLDSV VLPLFPPEVHSRLALLPQQERLAYSLLLTIDPEGVVRNFEIHPSLVQSRAHLSYGQVQALLATAADLGPDEEVPELMALL QNLLRLSQVLRVKRHQAGGFDLPLLDLLTPYSADESGYGPLLVSDRLGAHALMTEILLLANQILGHHLRRLGIPSLARVQ KPPTAEALQNFLRLANAMKLDLNLQDPEAVTLADWQRICARITAPDVLAAGTSPALVAQLLATLPPVEYCLQPLQEPLGH FGLGLKEPYASFTAPLRRYADLLNLRALHLALSKGRDRRSPRSKTVVDLHGPGSYDQIDWQVLPPKVHEEWQAFLQAQLP KIQAGYQLHQQAERELMGLKRCEFMQKHLGETFPGLIVSVQNYGFFVQVDPILAEGLVRVSTLKNDWYEYRSRQQALVGR KSRRQFRLGDRVEVQIKNVDYYRQQIDLAVIGEGRPYEEEE
Sequences:
>Translated_761_residues MDFSRIFHHFFSQPAEQWTDKDALLALLPASDPEAPEMLEIALDGLVRAGFLERTGDPPRYRRKPDESLVVGRLRCSSKG FCFAVRDEPGAEDVYIHGSNLSGAWNGDQVIARITKEGNRRRSPEGEVVAVVERANPTLVGRLKQTEEGFRVVPLDDRLL FELALTEGSPAELAEGRVAYVEVERYPLGNLPPVGTIRKILGNGPEASIDADLVCCKYDLPQEFPPAVLEAAATLPKKLS RSDQKNRRDLRDWFCVTLEPLDLQHPHGLEPNVAVSLQRQEEGHWLLGVHIADVAHWLDPDHPLEREAQRRTATVYLDSV VLPLFPPEVHSRLALLPQQERLAYSLLLTIDPEGVVRNFEIHPSLVQSRAHLSYGQVQALLATAADLGPDEEVPELMALL QNLLRLSQVLRVKRHQAGGFDLPLLDLLTPYSADESGYGPLLVSDRLGAHALMTEILLLANQILGHHLRRLGIPSLARVQ KPPTAEALQNFLRLANAMKLDLNLQDPEAVTLADWQRICARITAPDVLAAGTSPALVAQLLATLPPVEYCLQPLQEPLGH FGLGLKEPYASFTAPLRRYADLLNLRALHLALSKGRDRRSPRSKTVVDLHGPGSYDQIDWQVLPPKVHEEWQAFLQAQLP KIQAGYQLHQQAERELMGLKRCEFMQKHLGETFPGLIVSVQNYGFFVQVDPILAEGLVRVSTLKNDWYEYRSRQQALVGR KSRRQFRLGDRVEVQIKNVDYYRQQIDLAVIGEGRPYEEEE >Mature_761_residues MDFSRIFHHFFSQPAEQWTDKDALLALLPASDPEAPEMLEIALDGLVRAGFLERTGDPPRYRRKPDESLVVGRLRCSSKG FCFAVRDEPGAEDVYIHGSNLSGAWNGDQVIARITKEGNRRRSPEGEVVAVVERANPTLVGRLKQTEEGFRVVPLDDRLL FELALTEGSPAELAEGRVAYVEVERYPLGNLPPVGTIRKILGNGPEASIDADLVCCKYDLPQEFPPAVLEAAATLPKKLS RSDQKNRRDLRDWFCVTLEPLDLQHPHGLEPNVAVSLQRQEEGHWLLGVHIADVAHWLDPDHPLEREAQRRTATVYLDSV VLPLFPPEVHSRLALLPQQERLAYSLLLTIDPEGVVRNFEIHPSLVQSRAHLSYGQVQALLATAADLGPDEEVPELMALL QNLLRLSQVLRVKRHQAGGFDLPLLDLLTPYSADESGYGPLLVSDRLGAHALMTEILLLANQILGHHLRRLGIPSLARVQ KPPTAEALQNFLRLANAMKLDLNLQDPEAVTLADWQRICARITAPDVLAAGTSPALVAQLLATLPPVEYCLQPLQEPLGH FGLGLKEPYASFTAPLRRYADLLNLRALHLALSKGRDRRSPRSKTVVDLHGPGSYDQIDWQVLPPKVHEEWQAFLQAQLP KIQAGYQLHQQAERELMGLKRCEFMQKHLGETFPGLIVSVQNYGFFVQVDPILAEGLVRVSTLKNDWYEYRSRQQALVGR KSRRQFRLGDRVEVQIKNVDYYRQQIDLAVIGEGRPYEEEE
Specific function: Not known; control resistance to the carbonic anhydrase inhibitor acetazolamide [H]
COG id: COG0557
COG function: function code K; Exoribonuclease R
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 S1 motif domain [H]
Homologues:
Organism=Homo sapiens, GI190014625, Length=483, Percent_Identity=25.879917184265, Blast_Score=130, Evalue=4e-30, Organism=Homo sapiens, GI190014623, Length=483, Percent_Identity=25.879917184265, Blast_Score=130, Evalue=5e-30, Organism=Homo sapiens, GI134288890, Length=420, Percent_Identity=25.952380952381, Blast_Score=109, Evalue=1e-23, Organism=Homo sapiens, GI19115966, Length=380, Percent_Identity=25.7894736842105, Blast_Score=87, Evalue=6e-17, Organism=Homo sapiens, GI219521928, Length=380, Percent_Identity=25.7894736842105, Blast_Score=87, Evalue=7e-17, Organism=Escherichia coli, GI87082383, Length=690, Percent_Identity=29.4202898550725, Blast_Score=250, Evalue=2e-67, Organism=Caenorhabditis elegans, GI212645896, Length=496, Percent_Identity=23.991935483871, Blast_Score=105, Evalue=6e-23, Organism=Caenorhabditis elegans, GI17553506, Length=462, Percent_Identity=24.025974025974, Blast_Score=84, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6324552, Length=671, Percent_Identity=23.6959761549926, Blast_Score=118, Evalue=4e-27, Organism=Saccharomyces cerevisiae, GI6320499, Length=453, Percent_Identity=23.1788079470199, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24649634, Length=492, Percent_Identity=25.609756097561, Blast_Score=121, Evalue=2e-27, Organism=Drosophila melanogaster, GI24654592, Length=393, Percent_Identity=24.9363867684478, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI19922976, Length=393, Percent_Identity=24.9363867684478, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI24654597, Length=393, Percent_Identity=24.9363867684478, Blast_Score=108, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011129 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR003029 - InterPro: IPR022967 - InterPro: IPR013223 - InterPro: IPR001900 - InterPro: IPR022966 - InterPro: IPR011805 [H]
Pfam domain/function: PF08206 OB_RNB; PF00773 RNB; PF00575 S1 [H]
EC number: 2.1.2.9
Molecular weight: Translated: 85383; Mature: 85383
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: PS50126 S1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFSRIFHHFFSQPAEQWTDKDALLALLPASDPEAPEMLEIALDGLVRAGFLERTGDPPR CCHHHHHHHHHCCHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCH YRRKPDESLVVGRLRCSSKGFCFAVRDEPGAEDVYIHGSNLSGAWNGDQVIARITKEGNR HCCCCCCHHEEEEEEECCCCCEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCC RRSPEGEVVAVVERANPTLVGRLKQTEEGFRVVPLDDRLLFELALTEGSPAELAEGRVAY CCCCCCCEEEEEECCCCCEEEEHHHCCCCCEEEECCCCEEEEEEECCCCCHHHHCCCEEE VEVERYPLGNLPPVGTIRKILGNGPEASIDADLVCCKYDLPQEFPPAVLEAAATLPKKLS EEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH RSDQKNRRDLRDWFCVTLEPLDLQHPHGLEPNVAVSLQRQEEGHWLLGVHIADVAHWLDP HCHHHHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEHHHHHHHCCC DHPLEREAQRRTATVYLDSVVLPLFPPEVHSRLALLPQQERLAYSLLLTIDPEGVVRNFE CCCHHHHHHHHEEEEEEEEEECCCCCHHHHHHHHCCCCHHHEEEEEEEEECCCCCEEEEE IHPSLVQSRAHLSYGQVQALLATAADLGPDEEVPELMALLQNLLRLSQVLRVKRHQAGGF CCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DLPLLDLLTPYSADESGYGPLLVSDRLGAHALMTEILLLANQILGHHLRRLGIPSLARVQ CCCHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC KPPTAEALQNFLRLANAMKLDLNLQDPEAVTLADWQRICARITAPDVLAAGTSPALVAQL CCCCHHHHHHHHHHHHHEEEEEECCCCCEEEHHHHHHHHHHCCCCHHHCCCCCHHHHHHH LATLPPVEYCLQPLQEPLGHFGLGLKEPYASFTAPLRRYADLLNLRALHLALSKGRDRRS HHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PRSKTVVDLHGPGSYDQIDWQVLPPKVHEEWQAFLQAQLPKIQAGYQLHQQAERELMGLK CCCCCEEEECCCCCCCCCCEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH RCEFMQKHLGETFPGLIVSVQNYGFFVQVDPILAEGLVRVSTLKNDWYEYRSRQQALVGR HHHHHHHHCCCCCCCEEEEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSRRQFRLGDRVEVQIKNVDYYRQQIDLAVIGEGRPYEEEE HHHHHCCCCCEEEEEEECCHHHHHHCCEEEEECCCCCCCCC >Mature Secondary Structure MDFSRIFHHFFSQPAEQWTDKDALLALLPASDPEAPEMLEIALDGLVRAGFLERTGDPPR CCHHHHHHHHHCCHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCH YRRKPDESLVVGRLRCSSKGFCFAVRDEPGAEDVYIHGSNLSGAWNGDQVIARITKEGNR HCCCCCCHHEEEEEEECCCCCEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCC RRSPEGEVVAVVERANPTLVGRLKQTEEGFRVVPLDDRLLFELALTEGSPAELAEGRVAY CCCCCCCEEEEEECCCCCEEEEHHHCCCCCEEEECCCCEEEEEEECCCCCHHHHCCCEEE VEVERYPLGNLPPVGTIRKILGNGPEASIDADLVCCKYDLPQEFPPAVLEAAATLPKKLS EEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH RSDQKNRRDLRDWFCVTLEPLDLQHPHGLEPNVAVSLQRQEEGHWLLGVHIADVAHWLDP HCHHHHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEHHHHHHHCCC DHPLEREAQRRTATVYLDSVVLPLFPPEVHSRLALLPQQERLAYSLLLTIDPEGVVRNFE CCCHHHHHHHHEEEEEEEEEECCCCCHHHHHHHHCCCCHHHEEEEEEEEECCCCCEEEEE IHPSLVQSRAHLSYGQVQALLATAADLGPDEEVPELMALLQNLLRLSQVLRVKRHQAGGF CCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DLPLLDLLTPYSADESGYGPLLVSDRLGAHALMTEILLLANQILGHHLRRLGIPSLARVQ CCCHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC KPPTAEALQNFLRLANAMKLDLNLQDPEAVTLADWQRICARITAPDVLAAGTSPALVAQL CCCCHHHHHHHHHHHHHEEEEEECCCCCEEEHHHHHHHHHHCCCCHHHCCCCCHHHHHHH LATLPPVEYCLQPLQEPLGHFGLGLKEPYASFTAPLRRYADLLNLRALHLALSKGRDRRS HHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PRSKTVVDLHGPGSYDQIDWQVLPPKVHEEWQAFLQAQLPKIQAGYQLHQQAERELMGLK CCCCCEEEECCCCCCCCCCEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH RCEFMQKHLGETFPGLIVSVQNYGFFVQVDPILAEGLVRVSTLKNDWYEYRSRQQALVGR HHHHHHHHCCCCCCCEEEEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSRRQFRLGDRVEVQIKNVDYYRQQIDLAVIGEGRPYEEEE HHHHHCCCCCEEEEEEECCHHHHHHCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 10-formyltetrahydrofolate; L-methionyl-tRNA(fMet); H2O
Specific reaction: 10-formyltetrahydrofolate + L-methionyl-tRNA(fMet) + H2O = tetrahydrofolate + N-formylmethionyl-tRNA(fMet)
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7727754; 8905231 [H]