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The map label for this gene is 86604853

Identifier: 86604853

GI number: 86604853

Start: 116885

End: 117061

Strand: Reverse

Name: 86604853

Synonym: CYA_0123

Alternate gene names: NA

Gene position: 117061-116885 (Counterclockwise)

Preceding gene: 86604854

Following gene: 86604852

Centisome position: 3.99

GC content: 56.5

Gene sequence:

>177_bases
ATGGAGGAAACGCTAGGTCTCTCTCTGGAGCAAGAATTTCGCCAGCGGGCTTTCGAGACGCTGGTAGCTCGCATGAGCCC
TGAGCAGGCCAAGGACATCCTGGTCAAGCTGCACAAGCAAATGCTGTTGCAGGAGGCCACCTACCGCCAGTTGCTGCGCC
ATTCTCTTGAGGTTTGA

Upstream 100 bases:

>100_bases
TAAGATATGTATTGTCCTGCTTGCAGTGCTTGTTGGGAGCAGCGCTGGGATATCCTAGCGCGAGTCTCTCACCTACCCTA
AGAGTCTCAAGGTGACGACA

Downstream 100 bases:

>100_bases
TGCACGCCCTTTCGTTTCCCACCTGGTGGATTCACATTGCCAGCGTCTTGGAATGGCTGGCGGCCATTGTTTGCGTGTGG
CAGTTTGGGGAGCGAACGGG

Product: phycobilisome degradation family protein

Products: NA

Alternate protein names: Phycobilisome Degradation Protein NblA

Number of amino acids: Translated: 58; Mature: 58

Protein sequence:

>58_residues
MEETLGLSLEQEFRQRAFETLVARMSPEQAKDILVKLHKQMLLQEATYRQLLRHSLEV

Sequences:

>Translated_58_residues
MEETLGLSLEQEFRQRAFETLVARMSPEQAKDILVKLHKQMLLQEATYRQLLRHSLEV
>Mature_58_residues
MEETLGLSLEQEFRQRAFETLVARMSPEQAKDILVKLHKQMLLQEATYRQLLRHSLEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6884; Mature: 6884

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEETLGLSLEQEFRQRAFETLVARMSPEQAKDILVKLHKQMLLQEATYRQLLRHSLEV
CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEETLGLSLEQEFRQRAFETLVARMSPEQAKDILVKLHKQMLLQEATYRQLLRHSLEV
CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA