| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
Click here to switch to the map view.
The map label for this gene is 86604803
Identifier: 86604803
GI number: 86604803
Start: 69815
End: 70660
Strand: Reverse
Name: 86604803
Synonym: CYA_0073
Alternate gene names: NA
Gene position: 70660-69815 (Counterclockwise)
Preceding gene: 86604806
Following gene: 86604798
Centisome position: 2.41
GC content: 60.4
Gene sequence:
>846_bases GTGAATTGGAGACGGACTTACTATCTCCCTGGATTGCTCTCGGCCCTAGCTTTATGGGGATCCCCCGCCTGGGCCGGAGA GTATTTCACCGAGGAAGTGACCAGCCCTAGCCTGGAGATCATCCACGGCTGGCGGCAGGAAGTGGACGGCATTAACGTCA CCATCACCAACACCAGCCTGGGATCTTTTCGGGTGCCGCTGGAAATCGATATGGAGGATCGAACTAGCTGTGAGCGAGCC GACTTAGTGCTGACGAACAATCGCGTTATGCCAATGGGATCCTTTCAAGACTGCATTCTCAACATCTTTCCCTACTTGGA TAAATTCATCAACCAAGAAGTCGCCAGCATTCGGGTCGCCCTCAAAGGGCCGGCCCCCCTCCTGGAGATCCCCCTGGAAG AGTCGGATCGGCTGATCTTGGCCCAGGTGGCCAACCAATCGCGGGAAGCCTTTGTCTTCTTTCAGCAGGAGCTGGCCCGC GTCTTGGCGCTCTTGAAGCAGCCCGATCCCGGCCAGGCCGAGACGGCCCCACCGACGGCCAGCCCAACGCCGACTGCTGC CGCCGAATCTGCACCCAACCCGGGAGATTTCGTGATCGTGGGCTCGATTCAGGAAGAACGGGTGGGGGCTGGCAGCCGCC TGAGCGTAGAGGCGATCAACCGCAGCACCCGCACCGTCCTCAACGCTCGTGCTCGCTTCACGTTCTACCGGGGAGAGGAG GTGGTGGAGACGCGGGTGGTCGCGTTTGAACCCAGCGACGTGCCGCCGGGACAACGCGCCTCTGCTAGGGTTCTGAAAAC CGATGCCAATTGGGATCGGGTCACCGTCACCTTCCAGTGGCAGTAG
Upstream 100 bases:
>100_bases GCCCTGGGGCTAGGCTATTGCCATCTCGGGGCAGCAGGCAACATCTGGGTGCGGTTTGGCTCTACCCCGACATCTGCGAG TTCAAGGAGGGAAAGTTGAG
Downstream 100 bases:
>100_bases GGATCCCTAAGGTGCCAGGGCGTTCCCTCGCAGCAGGCTGCCTAGAGTCTTAACCGTGATCTTGAACTGCACCCAAGGGT TCATGGGCACCACCGTCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MNWRRTYYLPGLLSALALWGSPAWAGEYFTEEVTSPSLEIIHGWRQEVDGINVTITNTSLGSFRVPLEIDMEDRTSCERA DLVLTNNRVMPMGSFQDCILNIFPYLDKFINQEVASIRVALKGPAPLLEIPLEESDRLILAQVANQSREAFVFFQQELAR VLALLKQPDPGQAETAPPTASPTPTAAAESAPNPGDFVIVGSIQEERVGAGSRLSVEAINRSTRTVLNARARFTFYRGEE VVETRVVAFEPSDVPPGQRASARVLKTDANWDRVTVTFQWQ
Sequences:
>Translated_281_residues MNWRRTYYLPGLLSALALWGSPAWAGEYFTEEVTSPSLEIIHGWRQEVDGINVTITNTSLGSFRVPLEIDMEDRTSCERA DLVLTNNRVMPMGSFQDCILNIFPYLDKFINQEVASIRVALKGPAPLLEIPLEESDRLILAQVANQSREAFVFFQQELAR VLALLKQPDPGQAETAPPTASPTPTAAAESAPNPGDFVIVGSIQEERVGAGSRLSVEAINRSTRTVLNARARFTFYRGEE VVETRVVAFEPSDVPPGQRASARVLKTDANWDRVTVTFQWQ >Mature_281_residues MNWRRTYYLPGLLSALALWGSPAWAGEYFTEEVTSPSLEIIHGWRQEVDGINVTITNTSLGSFRVPLEIDMEDRTSCERA DLVLTNNRVMPMGSFQDCILNIFPYLDKFINQEVASIRVALKGPAPLLEIPLEESDRLILAQVANQSREAFVFFQQELAR VLALLKQPDPGQAETAPPTASPTPTAAAESAPNPGDFVIVGSIQEERVGAGSRLSVEAINRSTRTVLNARARFTFYRGEE VVETRVVAFEPSDVPPGQRASARVLKTDANWDRVTVTFQWQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31224; Mature: 31224
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWRRTYYLPGLLSALALWGSPAWAGEYFTEEVTSPSLEIIHGWRQEVDGINVTITNTSL CCCCEEEECHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCC GSFRVPLEIDMEDRTSCERADLVLTNNRVMPMGSFQDCILNIFPYLDKFINQEVASIRVA CCEEEEEEECCCCCCCCCCCCEEEECCEEEECCCHHHHHHHHHHHHHHHHCCHHHEEEEE LKGPAPLLEIPLEESDRLILAQVANQSREAFVFFQQELARVLALLKQPDPGQAETAPPTA ECCCCCEEECCCCCCCCEEEEEHHCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCC SPTPTAAAESAPNPGDFVIVGSIQEERVGAGSRLSVEAINRSTRTVLNARARFTFYRGEE CCCCCCCCCCCCCCCCEEEEECCHHHHCCCCCEEEHHHHCCHHHHHHHHHEEEEEECCCC VVETRVVAFEPSDVPPGQRASARVLKTDANWDRVTVTFQWQ EEEEEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEEEEEC >Mature Secondary Structure MNWRRTYYLPGLLSALALWGSPAWAGEYFTEEVTSPSLEIIHGWRQEVDGINVTITNTSL CCCCEEEECHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCC GSFRVPLEIDMEDRTSCERADLVLTNNRVMPMGSFQDCILNIFPYLDKFINQEVASIRVA CCEEEEEEECCCCCCCCCCCCEEEECCEEEECCCHHHHHHHHHHHHHHHHCCHHHEEEEE LKGPAPLLEIPLEESDRLILAQVANQSREAFVFFQQELARVLALLKQPDPGQAETAPPTA ECCCCCEEECCCCCCCCEEEEEHHCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCC SPTPTAAAESAPNPGDFVIVGSIQEERVGAGSRLSVEAINRSTRTVLNARARFTFYRGEE CCCCCCCCCCCCCCCCEEEEECCHHHHCCCCCEEEHHHHCCHHHHHHHHHEEEEEECCCC VVETRVVAFEPSDVPPGQRASARVLKTDANWDRVTVTFQWQ EEEEEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA