Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86604736

Identifier: 86604736

GI number: 86604736

Start: 2331

End: 3152

Strand: Reverse

Name: 86604736

Synonym: CYA_0002

Alternate gene names: NA

Gene position: 3152-2331 (Counterclockwise)

Preceding gene: 86604737

Following gene: NA

Centisome position: 0.11

GC content: 66.18

Gene sequence:

>822_bases
ATGCTCTCTTCTCTCTCTGCCTTGCCGGTTCACCTCTACCGCTGCCTGAGCTGTGGTCAGGAAGGGCTGAACCTGCCACC
GGGACGTGAGCCGGGAGCCGCGGCGGATCGGGTTTACTGTCCCCGTTGCGGCCAGATCTACCCCATCACCGCCTTTGGAG
CGGTGGATTTTTTGGCCGCCGCGCGGGACTTGCCGCTCACTCCCGCTCAGGCCATTGCCCATCTGCCCGGGTTTGCCTGG
GGCTACGATCGCCTCTGGCGGCCTTGGGCGCTGTCGCTGTTGTCGGGGGAGCGTTTCGGCAGCGAGCGGGAAGGCCAATT
GCTGGCGGAACTGGTGGGGGAGGCAGATCCCGTCTTGGATTTGGGCACGGCAGGGGGGTACTGGAGCCGCCTCCTCTTGG
CCAGGGATCCGCAGCGGACGGTGATCGGCCTAGACAACGCGACGGGAGTGCTGGCGGAGGCGGCCCAGCAGGCCCAGCCC
CACTGGCAGCGCTACAGCCTGGTGCGAGCCCGGGCGGAGCAGCTTCCCCTGGCCTCTGGAGCCTTTGGGGCGGTGATCAG
CGGCGCCACCCTGAACGAGGTGCCGTTGGATCCCTGTCTGCGGGAAGTGGCCCGTGTTTTGAAACCGGGAGGGGTGTTTG
TCTCGATGCACAGCCAGCAGGTGCAGGGATGGGGGCAGAGGGTGCAGCAGTTGCTGGAGGCGACCGGCCTTCGCTTTTTC
TCCGCAGACCAGTTGCGCTGGCACTTTGCCCAGGTGGGGTTGCGCTTGGAGCGCTATCTCAGCTTCGGCTGGGTGGTTTT
TGTGCAGGCAGTGCGCCTCTAG

Upstream 100 bases:

>100_bases
ATCCCCTCTCGCTGCGGGATTGATTAACCTGGGAGGGTGGTTGTTGGGGCCGGCGCCCGGCAACTGCCCTTTTGTTTTGC
GGCTGTCGTCAGGTTGTGTC

Downstream 100 bases:

>100_bases
GGGATCCACTCCAGGCCAACGCCAAAGCTGGATTCCCGCGCCAAGGTGGAGTGGCGCAGGCTGTAGCGGGCAGCAAGACG
AAGGGAAGGGCTAATGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MLSSLSALPVHLYRCLSCGQEGLNLPPGREPGAAADRVYCPRCGQIYPITAFGAVDFLAAARDLPLTPAQAIAHLPGFAW
GYDRLWRPWALSLLSGERFGSEREGQLLAELVGEADPVLDLGTAGGYWSRLLLARDPQRTVIGLDNATGVLAEAAQQAQP
HWQRYSLVRARAEQLPLASGAFGAVISGATLNEVPLDPCLREVARVLKPGGVFVSMHSQQVQGWGQRVQQLLEATGLRFF
SADQLRWHFAQVGLRLERYLSFGWVVFVQAVRL

Sequences:

>Translated_273_residues
MLSSLSALPVHLYRCLSCGQEGLNLPPGREPGAAADRVYCPRCGQIYPITAFGAVDFLAAARDLPLTPAQAIAHLPGFAW
GYDRLWRPWALSLLSGERFGSEREGQLLAELVGEADPVLDLGTAGGYWSRLLLARDPQRTVIGLDNATGVLAEAAQQAQP
HWQRYSLVRARAEQLPLASGAFGAVISGATLNEVPLDPCLREVARVLKPGGVFVSMHSQQVQGWGQRVQQLLEATGLRFF
SADQLRWHFAQVGLRLERYLSFGWVVFVQAVRL
>Mature_273_residues
MLSSLSALPVHLYRCLSCGQEGLNLPPGREPGAAADRVYCPRCGQIYPITAFGAVDFLAAARDLPLTPAQAIAHLPGFAW
GYDRLWRPWALSLLSGERFGSEREGQLLAELVGEADPVLDLGTAGGYWSRLLLARDPQRTVIGLDNATGVLAEAAQQAQP
HWQRYSLVRARAEQLPLASGAFGAVISGATLNEVPLDPCLREVARVLKPGGVFVSMHSQQVQGWGQRVQQLLEATGLRFF
SADQLRWHFAQVGLRLERYLSFGWVVFVQAVRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29856; Mature: 29856

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSSLSALPVHLYRCLSCGQEGLNLPPGREPGAAADRVYCPRCGQIYPITAFGAVDFLAA
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEHHHHHHHHHHH
ARDLPLTPAQAIAHLPGFAWGYDRLWRPWALSLLSGERFGSEREGQLLAELVGEADPVLD
HCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEE
LGTAGGYWSRLLLARDPQRTVIGLDNATGVLAEAAQQAQPHWQRYSLVRARAEQLPLASG
CCCCCHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCC
AFGAVISGATLNEVPLDPCLREVARVLKPGGVFVSMHSQQVQGWGQRVQQLLEATGLRFF
CHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHCCEEE
SADQLRWHFAQVGLRLERYLSFGWVVFVQAVRL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLSSLSALPVHLYRCLSCGQEGLNLPPGREPGAAADRVYCPRCGQIYPITAFGAVDFLAA
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEHHHHHHHHHHH
ARDLPLTPAQAIAHLPGFAWGYDRLWRPWALSLLSGERFGSEREGQLLAELVGEADPVLD
HCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEE
LGTAGGYWSRLLLARDPQRTVIGLDNATGVLAEAAQQAQPHWQRYSLVRARAEQLPLASG
CCCCCHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCC
AFGAVISGATLNEVPLDPCLREVARVLKPGGVFVSMHSQQVQGWGQRVQQLLEATGLRFF
CHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHCCEEE
SADQLRWHFAQVGLRLERYLSFGWVVFVQAVRL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA