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The map label for this gene is repAf1

Identifier: 86361299

GI number: 86361299

Start: 638772

End: 639980

Strand: Direct

Name: repAf1

Synonym: RHE_PF00571

Alternate gene names: 86361299

Gene position: 638772-639980 (Clockwise)

Preceding gene: 86361298

Following gene: 86361300

Centisome position: 99.42

GC content: 61.12

Gene sequence:

>1209_bases
ATGAACGCTAATTCGAACGCCTTGAAGGCTACGCCGCTGCATTTCGAGGATCAGATTCTCGAGCACGGCGATGTGATTTC
GAAGAAGCTGCATCTCTTGAGCGTGCAGCGCTTTCCGCCGAACGCAAAGAAGACGCTGCGCAGCTTCTCGCTCGCCGAGG
TCGCCAATTATGTCGGGGCGTCGCAGAGCACGCTGAAGAAACTGCATCTCGAAGGCAAAGGCCCCTGCCCGCAGACCTCA
CCTTCCGGGCGGCGCTCCTATAGCGCCGAGCAGATGCTGGAGCTCAGGCGCTATCTCGATGCGCATGGTCGCTCCGAGAG
CCGCATGTATGTGCCCCATCGCCGCGGCCATGAGAAGCTGCAGGTCATCGCCGTCGTCAATTTCAAGGGCGGCTCGGGCA
AGACGACGACATCAGCCCATCTCGCCCAGCATCTGGCGCTGACCGGTCATCGCGTGCTTGCCATCGATCTCGATCCGCAG
GCGTCCCTCTCTTCCCTGCACGGCTTCCAGCCGGAATTCGACCAGGCCTCCTCGCTCTATGAGGCGATCCGCTATGACGG
CAAGAGGAAGCCGCTCTCTGAGATCATCCACAGGACGAATTTTCCCGGCCTCGATATCGTGCCGGCCAATCTCGACTTGC
AGGAATATGAATACGACACGCCGCTCGCCATGGCCGACAAATCGAGCAATGACGGCAAGACCTTCTTCACCCGTATCTCG
CGCGCGCTCGCTGAGGTCGATGACCGCTACGACGTCGTCGTCATCGATTGCCCGCCGCAGCTCGGCTACCTCACGCTGAC
GGCGCTGACGGCGGCGACCAGCGTTTTGATCACCATCCATCCGCAGATGCTCGACGTCATGTCGATGGGGCAGTTCCTGC
TCATGCTCGGCGGCATCCTGAAGCCGATCCGTGCCGCCGGCGCCGAAGTGAACCTCTCCTGGTACCGCTATCTCATTACC
CGCTATGAGCCGACCGACGTGCCGCAGGCGCAGATGGTCGGCTTCATGTCGACGATGTTCCACGAATTCATGCTGAAGAA
CCAGATGGTCAAATCCACCGCGATCTCGGATGCCGGGATCACCAAGCAGACGCTTTACGAGGTCGAGCGCGCCTCGATGA
ACCGGGGAACCTATGATCGCGCGCTGGAGGCCATGGGCGCCGTCAACGCGGAGATCGCCGGCCTTATTCACCAGGCATGG
GGGCGGTGA

Upstream 100 bases:

>100_bases
CGTTAACCTTAAATTTCTTGGCGGGCATCGGAGAATCGCGGATAATAACGGTTATAGGGGCTTTTGATCCCGAAAATCGT
TATCCAAGAGATTGCTACCG

Downstream 100 bases:

>100_bases
GTTTGTCGGCTGACAAATTCGCCGTTTCCGTGAAGCAAATCAATGGAATGACCGCAATCGGAGGAAGCGATGGCACGAAA
GAATCTGCTGGAAGGGCTGG

Product: plasmid partitioning protein RepAf1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MNANSNALKATPLHFEDQILEHGDVISKKLHLLSVQRFPPNAKKTLRSFSLAEVANYVGASQSTLKKLHLEGKGPCPQTS
PSGRRSYSAEQMLELRRYLDAHGRSESRMYVPHRRGHEKLQVIAVVNFKGGSGKTTTSAHLAQHLALTGHRVLAIDLDPQ
ASLSSLHGFQPEFDQASSLYEAIRYDGKRKPLSEIIHRTNFPGLDIVPANLDLQEYEYDTPLAMADKSSNDGKTFFTRIS
RALAEVDDRYDVVVIDCPPQLGYLTLTALTAATSVLITIHPQMLDVMSMGQFLLMLGGILKPIRAAGAEVNLSWYRYLIT
RYEPTDVPQAQMVGFMSTMFHEFMLKNQMVKSTAISDAGITKQTLYEVERASMNRGTYDRALEAMGAVNAEIAGLIHQAW
GR

Sequences:

>Translated_402_residues
MNANSNALKATPLHFEDQILEHGDVISKKLHLLSVQRFPPNAKKTLRSFSLAEVANYVGASQSTLKKLHLEGKGPCPQTS
PSGRRSYSAEQMLELRRYLDAHGRSESRMYVPHRRGHEKLQVIAVVNFKGGSGKTTTSAHLAQHLALTGHRVLAIDLDPQ
ASLSSLHGFQPEFDQASSLYEAIRYDGKRKPLSEIIHRTNFPGLDIVPANLDLQEYEYDTPLAMADKSSNDGKTFFTRIS
RALAEVDDRYDVVVIDCPPQLGYLTLTALTAATSVLITIHPQMLDVMSMGQFLLMLGGILKPIRAAGAEVNLSWYRYLIT
RYEPTDVPQAQMVGFMSTMFHEFMLKNQMVKSTAISDAGITKQTLYEVERASMNRGTYDRALEAMGAVNAEIAGLIHQAW
GR
>Mature_402_residues
MNANSNALKATPLHFEDQILEHGDVISKKLHLLSVQRFPPNAKKTLRSFSLAEVANYVGASQSTLKKLHLEGKGPCPQTS
PSGRRSYSAEQMLELRRYLDAHGRSESRMYVPHRRGHEKLQVIAVVNFKGGSGKTTTSAHLAQHLALTGHRVLAIDLDPQ
ASLSSLHGFQPEFDQASSLYEAIRYDGKRKPLSEIIHRTNFPGLDIVPANLDLQEYEYDTPLAMADKSSNDGKTFFTRIS
RALAEVDDRYDVVVIDCPPQLGYLTLTALTAATSVLITIHPQMLDVMSMGQFLLMLGGILKPIRAAGAEVNLSWYRYLIT
RYEPTDVPQAQMVGFMSTMFHEFMLKNQMVKSTAISDAGITKQTLYEVERASMNRGTYDRALEAMGAVNAEIAGLIHQAW
GR

Specific function: This Protein Is Essential For Plasmid Partition. It Ensures The Proper Distribution Of Newly Replicated Plasmids To Daughter Cells During Cell Division. Sopa Is Trans-Acting. [C]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR017818 [H]

Pfam domain/function: PF01656 CbiA; PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 44677; Mature: 44677

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNANSNALKATPLHFEDQILEHGDVISKKLHLLSVQRFPPNAKKTLRSFSLAEVANYVGA
CCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
SQSTLKKLHLEGKGPCPQTSPSGRRSYSAEQMLELRRYLDAHGRSESRMYVPHRRGHEKL
CHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEE
QVIAVVNFKGGSGKTTTSAHLAQHLALTGHRVLAIDLDPQASLSSLHGFQPEFDQASSLY
EEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCHHHHHHHH
EAIRYDGKRKPLSEIIHRTNFPGLDIVPANLDLQEYEYDTPLAMADKSSNDGKTFFTRIS
HHHHCCCCCCCHHHHHHHCCCCCCEEEECCCCHHHHCCCCCEEECCCCCCCCHHHHHHHH
RALAEVDDRYDVVVIDCPPQLGYLTLTALTAATSVLITIHPQMLDVMSMGQFLLMLGGIL
HHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHH
KPIRAAGAEVNLSWYRYLITRYEPTDVPQAQMVGFMSTMFHEFMLKNQMVKSTAISDAGI
HHHHHCCCCEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TKQTLYEVERASMNRGTYDRALEAMGAVNAEIAGLIHQAWGR
HHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MNANSNALKATPLHFEDQILEHGDVISKKLHLLSVQRFPPNAKKTLRSFSLAEVANYVGA
CCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
SQSTLKKLHLEGKGPCPQTSPSGRRSYSAEQMLELRRYLDAHGRSESRMYVPHRRGHEKL
CHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEE
QVIAVVNFKGGSGKTTTSAHLAQHLALTGHRVLAIDLDPQASLSSLHGFQPEFDQASSLY
EEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCHHHHHHHH
EAIRYDGKRKPLSEIIHRTNFPGLDIVPANLDLQEYEYDTPLAMADKSSNDGKTFFTRIS
HHHHCCCCCCCHHHHHHHCCCCCCEEEECCCCHHHHCCCCCEEECCCCCCCCHHHHHHHH
RALAEVDDRYDVVVIDCPPQLGYLTLTALTAATSVLITIHPQMLDVMSMGQFLLMLGGIL
HHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHH
KPIRAAGAEVNLSWYRYLITRYEPTDVPQAQMVGFMSTMFHEFMLKNQMVKSTAISDAGI
HHHHHCCCCEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TKQTLYEVERASMNRGTYDRALEAMGAVNAEIAGLIHQAWGR
HHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]