Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

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The map label for this gene is 86361297

Identifier: 86361297

GI number: 86361297

Start: 636594

End: 637448

Strand: Direct

Name: 86361297

Synonym: RHE_PF00569

Alternate gene names: NA

Gene position: 636594-637448 (Clockwise)

Preceding gene: 86361296

Following gene: 86361298

Centisome position: 99.08

GC content: 61.87

Gene sequence:

>855_bases
ATGAAGATCGGCTTCTATACCTCGACATTCAATGACCGTCCGCTGGAGGAAGTGGTGGATTTTGCCGCATCGGCGGGATT
CGATGCGATCGAGATCGATGTCGGCGGCCATATCAAGACGCCGGACCGGGTGGACGACGCCGTCTCGCTGGCAAGAAGCC
GTGGCCTTTTCGTCTCGTCGATCACCTATTTCGGCAATCAGCTCGATGCCGACCGCGACAAGCGGCGGGAACTTCGGGCA
CGAACGGCCGAATTTGCAAACGCGATCGGCGGAGCGGGAGTCCCGATCTTCGTGATCTTTCCCGGCCGGGACGACACGGC
GAGCGAGGAAGCCAATTATGACGATTTCGCCGACTTCGCGAACGGGCTGATCGCAGAGACGCAGGCAAGCAGCCTCACCT
TCGCGATCGAGAATTGGCCGGGACCAAAGGACGATTTTGTCGGGACGACGCCTCGGGGATGGCAGGAGCTTTTCCGCCGG
ATCACCGATCGCCGCTTCGGCCTCGAATTCGACCCGTCGCACCTCATCCGCATCGGCGTCGATCCCTATCGAGCGCTGGA
GGCGGTGAAGGATCGCATCGCGATCCTGCACGCCAAGGACACGACGATCGACGCCGAGGCCCTGCAGTCGATCGGCTATC
ATGGCAAGGGCTGGTGGCAATACAAGCTGCCGGGGCTCGGCCTGCTCGACTGGTCGCGCTTCCTCCGCCAAGCCCGCGGC
TACGGTTTTGACGGCACGCTGTCGATCGAGCACGAGGACGCCGCCTATGGTTGGCCAGGCAAGGATCTCTCCGCGCGCAA
GGAGGGCGAGCGCCTCGGCCTCGATTATCTCAAAAGTGTTTTGCACCAACTTTGA

Upstream 100 bases:

>100_bases
CGTGGCGCAGCGCACGCGCTCGCCGCTGAAATTCATGGATCGGCTGAACAGTTGAAACCGCCGCAAGGCCCCCGGATTTT
GATGAAGATCGGAGGATATG

Downstream 100 bases:

>100_bases
CGGCGAATTCGGGAGGAATTTCATGGCCCATGTTTCGGTCAACAATGCGCGCAAGGATTATGGCGCGTTCAAAGCCATCA
AAGGTGTGTCGGTCGATATC

Product: hypothetical protein

Products: NA

Alternate protein names: Xylose Isomerase Domain-Containing Protein; Sugar Phosphate Isomerase/Epimerase; Xylose Isomerase Domain-Containing Protein TIM Barrel; AP-Endonuclease/AP-Lyase; Xylose Isomerase DomaiN-Containing Protein Tim Barrel; Xylose Isomerase Domain Protein; Xylose Isomerase-Like; Xylose Isomerase-Like Protein; Isomerase/Epimerase

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MKIGFYTSTFNDRPLEEVVDFAASAGFDAIEIDVGGHIKTPDRVDDAVSLARSRGLFVSSITYFGNQLDADRDKRRELRA
RTAEFANAIGGAGVPIFVIFPGRDDTASEEANYDDFADFANGLIAETQASSLTFAIENWPGPKDDFVGTTPRGWQELFRR
ITDRRFGLEFDPSHLIRIGVDPYRALEAVKDRIAILHAKDTTIDAEALQSIGYHGKGWWQYKLPGLGLLDWSRFLRQARG
YGFDGTLSIEHEDAAYGWPGKDLSARKEGERLGLDYLKSVLHQL

Sequences:

>Translated_284_residues
MKIGFYTSTFNDRPLEEVVDFAASAGFDAIEIDVGGHIKTPDRVDDAVSLARSRGLFVSSITYFGNQLDADRDKRRELRA
RTAEFANAIGGAGVPIFVIFPGRDDTASEEANYDDFADFANGLIAETQASSLTFAIENWPGPKDDFVGTTPRGWQELFRR
ITDRRFGLEFDPSHLIRIGVDPYRALEAVKDRIAILHAKDTTIDAEALQSIGYHGKGWWQYKLPGLGLLDWSRFLRQARG
YGFDGTLSIEHEDAAYGWPGKDLSARKEGERLGLDYLKSVLHQL
>Mature_284_residues
MKIGFYTSTFNDRPLEEVVDFAASAGFDAIEIDVGGHIKTPDRVDDAVSLARSRGLFVSSITYFGNQLDADRDKRRELRA
RTAEFANAIGGAGVPIFVIFPGRDDTASEEANYDDFADFANGLIAETQASSLTFAIENWPGPKDDFVGTTPRGWQELFRR
ITDRRFGLEFDPSHLIRIGVDPYRALEAVKDRIAILHAKDTTIDAEALQSIGYHGKGWWQYKLPGLGLLDWSRFLRQARG
YGFDGTLSIEHEDAAYGWPGKDLSARKEGERLGLDYLKSVLHQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31713; Mature: 31713

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGFYTSTFNDRPLEEVVDFAASAGFDAIEIDVGGHIKTPDRVDDAVSLARSRGLFVSS
CEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEH
ITYFGNQLDADRDKRRELRARTAEFANAIGGAGVPIFVIFPGRDDTASEEANYDDFADFA
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHH
NGLIAETQASSLTFAIENWPGPKDDFVGTTPRGWQELFRRITDRRFGLEFDPSHLIRIGV
CCCEECCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECC
DPYRALEAVKDRIAILHAKDTTIDAEALQSIGYHGKGWWQYKLPGLGLLDWSRFLRQARG
CHHHHHHHHHHHHEEEECCCCCCCHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHCC
YGFDGTLSIEHEDAAYGWPGKDLSARKEGERLGLDYLKSVLHQL
CCCCCEEEEECCCCCCCCCCCCCCHHHCCHHCCHHHHHHHHHHC
>Mature Secondary Structure
MKIGFYTSTFNDRPLEEVVDFAASAGFDAIEIDVGGHIKTPDRVDDAVSLARSRGLFVSS
CEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEH
ITYFGNQLDADRDKRRELRARTAEFANAIGGAGVPIFVIFPGRDDTASEEANYDDFADFA
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHH
NGLIAETQASSLTFAIENWPGPKDDFVGTTPRGWQELFRRITDRRFGLEFDPSHLIRIGV
CCCEECCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECC
DPYRALEAVKDRIAILHAKDTTIDAEALQSIGYHGKGWWQYKLPGLGLLDWSRFLRQARG
CHHHHHHHHHHHHEEEECCCCCCCHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHCC
YGFDGTLSIEHEDAAYGWPGKDLSARKEGERLGLDYLKSVLHQL
CCCCCEEEEECCCCCCCCCCCCCCHHHCCHHCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA