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The map label for this gene is yurM [H]

Identifier: 86361295

GI number: 86361295

Start: 634460

End: 635266

Strand: Direct

Name: yurM [H]

Synonym: RHE_PF00567

Alternate gene names: 86361295

Gene position: 634460-635266 (Clockwise)

Preceding gene: 86361294

Following gene: 86361296

Centisome position: 98.75

GC content: 58.86

Gene sequence:

>807_bases
ATGAGCTATCTCTTCATGCTGGTGATGTTCGTCTTCTTCGCCGGCCCCCTTACCTATCTGCTGTCGATGGCGCTACGTGA
CAAGCGCGAGGTCTATCGCGGCGCAGCGCGCTATATTCCCGACAATCCCACTGTCCAGAACTTCATCACCGTTCTCAACA
ACAGCTATTTTCCGATCTATCTCTGGAACGGCCTGAAGCTTGCGGCTCTGAGCGGGCTCGGCGTGCTGATAGTCGCCTTG
CCCGCCGCTTACGCGTTCTCCCGCTTTCAGTTCCGCGGCAAGGGCCTGTCGATGATGGGGCTTCTACTCTTTCAGATGAT
TTCGCCGCTTGTCATCATGGTGCCGCTCTATCGCTACATGAACCGCCTCGGCCTGCTGGACACACATTTTGCCGTCGTCA
TGGTCTACATCGCGCTCGGCGTTCCCTTGGCGACTTGGCTGTTGAAGAGCACCGTCGACGGCATTCCGCGCAGCCTCGAC
GAAGCTGCGATGATCGACGGCTGCAACCGCTTCTCGGTCTTCTGGCGCATCATCCTGCCCCTGTCTGCCCCAGGCATCGC
CTCGGTCTTCATCATCACCGTGATTGCCGGCTGGTCGCAATTCCTAGTGCCTTTCCTGCTGCTCACCAAAAATGACCTGA
TGCCGATCGGCGTCGGAATCTTTAACTTCCGTGGCATGCAGACCGACTCGTCCATTCAGCTGCTTGCGGCCGCCTGCCTG
ATTGCGGTTGTTCCAGCGATCGTGGCCTTCCTGTCGCTCCAGCGGTTGATCCTCGGCGCGATGACCAGCGGCGCGGTGAA
GGGATGA

Upstream 100 bases:

>100_bases
TGCTGATCATCAGCCTCGGGCTTGCCTTCGTCTACGCCTCGTTCCTGCCGAAGGAGGAAGAGCAATGAGCGGACGCACCG
GAACCCGGCTCGGCGACGCC

Downstream 100 bases:

>100_bases
GAGGGTCTGCTTCACTCTTCGCGCGTGAGGAAGGACTGAACGCATGAACCAGACGCTCGGCGCCAGACACTCCCCCGATC
TGACGGGCGCCAATGTCGAA

Product: sugar ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MSYLFMLVMFVFFAGPLTYLLSMALRDKREVYRGAARYIPDNPTVQNFITVLNNSYFPIYLWNGLKLAALSGLGVLIVAL
PAAYAFSRFQFRGKGLSMMGLLLFQMISPLVIMVPLYRYMNRLGLLDTHFAVVMVYIALGVPLATWLLKSTVDGIPRSLD
EAAMIDGCNRFSVFWRIILPLSAPGIASVFIITVIAGWSQFLVPFLLLTKNDLMPIGVGIFNFRGMQTDSSIQLLAAACL
IAVVPAIVAFLSLQRLILGAMTSGAVKG

Sequences:

>Translated_268_residues
MSYLFMLVMFVFFAGPLTYLLSMALRDKREVYRGAARYIPDNPTVQNFITVLNNSYFPIYLWNGLKLAALSGLGVLIVAL
PAAYAFSRFQFRGKGLSMMGLLLFQMISPLVIMVPLYRYMNRLGLLDTHFAVVMVYIALGVPLATWLLKSTVDGIPRSLD
EAAMIDGCNRFSVFWRIILPLSAPGIASVFIITVIAGWSQFLVPFLLLTKNDLMPIGVGIFNFRGMQTDSSIQLLAAACL
IAVVPAIVAFLSLQRLILGAMTSGAVKG
>Mature_267_residues
SYLFMLVMFVFFAGPLTYLLSMALRDKREVYRGAARYIPDNPTVQNFITVLNNSYFPIYLWNGLKLAALSGLGVLIVALP
AAYAFSRFQFRGKGLSMMGLLLFQMISPLVIMVPLYRYMNRLGLLDTHFAVVMVYIALGVPLATWLLKSTVDGIPRSLDE
AAMIDGCNRFSVFWRIILPLSAPGIASVFIITVIAGWSQFLVPFLLLTKNDLMPIGVGIFNFRGMQTDSSIQLLAAACLI
AVVPAIVAFLSLQRLILGAMTSGAVKG

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1790464, Length=220, Percent_Identity=35, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1787571, Length=257, Percent_Identity=28.4046692607004, Blast_Score=117, Evalue=6e-28,
Organism=Escherichia coli, GI1789860, Length=250, Percent_Identity=28, Blast_Score=84, Evalue=9e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29523; Mature: 29392

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SYLFMLVMFVFFAGPLTYLLSMALRDKREVYRGAARYIPDNPTVQNFITVLNNSYFPIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEE
LWNGLKLAALSGLGVLIVALPAAYAFSRFQFRGKGLSMMGLLLFQMISPLVIMVPLYRYM
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NRLGLLDTHFAVVMVYIALGVPLATWLLKSTVDGIPRSLDEAAMIDGCNRFSVFWRIILP
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LSAPGIASVFIITVIAGWSQFLVPFLLLTKNDLMPIGVGIFNFRGMQTDSSIQLLAAACL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHCCCCCCCHHHHHHHHHHH
IAVVPAIVAFLSLQRLILGAMTSGAVKG
HHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]