| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86361266
Identifier: 86361266
GI number: 86361266
Start: 603259
End: 603726
Strand: Reverse
Name: 86361266
Synonym: RHE_PF00537
Alternate gene names: NA
Gene position: 603726-603259 (Counterclockwise)
Preceding gene: 86361267
Following gene: 86361264
Centisome position: 93.96
GC content: 60.04
Gene sequence:
>468_bases ATGCTTGAGCATCTGCCCGAAATCTCGGGCAAGGAGAAGAGGGCCGGTGACGGCGGTCCCCTCGACGCCCTCATCGAGTT TTACGATGCCTTCAATTCCGGTGACATGAAAAGGCTTGAAGCCGTCTGGTTCGACGGCGAGGCACCCAGCATGGATAATC CCATCGGCGGGATAAGGCGCGGTTGGGCGTCGATCGCCGAGGGCTATACCAAGCTCTTCGGCGGCGCAGCCAGTGTCAAT GTGACTTTCCATGACTTCACCAGTAAGGGAGGGGAGGACTGGCATCTCTTCGTCGGCCGCGAGCGCGGCGTGTGCCGGAC GCCGAAAACACGCTTGGACCTTGCTTTCCGCACGACGCGCTGGTTCGTCCGGAATGATGGCCGATGGCGCCAACTCCATC ATCATGGATCGGTCGAGGATCCGACAATGCTCGCTGCTTATCAGCGGCTGATCTTTGGCGCGAGTTGA
Upstream 100 bases:
>100_bases ATCGTCGACGGCCGCCTGATCACTGGGCAGAACCCCGCCTCGTCCACGGCTGCGGCGCAATCGCTCCTGCGCCTCCTCGA GAACGAATATGAGCTTTCCA
Downstream 100 bases:
>100_bases TCGCAAGCTCCAATCGGAATGTTCCACGCGCGGCAATGCGCGTGGAACAATTGCGTTGGCTCTTGCTAGGGATTAAGCCC AGGAATCGGCGTCGATGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MLEHLPEISGKEKRAGDGGPLDALIEFYDAFNSGDMKRLEAVWFDGEAPSMDNPIGGIRRGWASIAEGYTKLFGGAASVN VTFHDFTSKGGEDWHLFVGRERGVCRTPKTRLDLAFRTTRWFVRNDGRWRQLHHHGSVEDPTMLAAYQRLIFGAS
Sequences:
>Translated_155_residues MLEHLPEISGKEKRAGDGGPLDALIEFYDAFNSGDMKRLEAVWFDGEAPSMDNPIGGIRRGWASIAEGYTKLFGGAASVN VTFHDFTSKGGEDWHLFVGRERGVCRTPKTRLDLAFRTTRWFVRNDGRWRQLHHHGSVEDPTMLAAYQRLIFGAS >Mature_155_residues MLEHLPEISGKEKRAGDGGPLDALIEFYDAFNSGDMKRLEAVWFDGEAPSMDNPIGGIRRGWASIAEGYTKLFGGAASVN VTFHDFTSKGGEDWHLFVGRERGVCRTPKTRLDLAFRTTRWFVRNDGRWRQLHHHGSVEDPTMLAAYQRLIFGAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17414; Mature: 17414
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEHLPEISGKEKRAGDGGPLDALIEFYDAFNSGDMKRLEAVWFDGEAPSMDNPIGGIRR CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCHHHHH GWASIAEGYTKLFGGAASVNVTFHDFTSKGGEDWHLFVGRERGVCRTPKTRLDLAFRTTR HHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEEHHEE WFVRNDGRWRQLHHHGSVEDPTMLAAYQRLIFGAS EEEECCCCEEEHHCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MLEHLPEISGKEKRAGDGGPLDALIEFYDAFNSGDMKRLEAVWFDGEAPSMDNPIGGIRR CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCHHHHH GWASIAEGYTKLFGGAASVNVTFHDFTSKGGEDWHLFVGRERGVCRTPKTRLDLAFRTTR HHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEEHHEE WFVRNDGRWRQLHHHGSVEDPTMLAAYQRLIFGAS EEEECCCCEEEHHCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA