| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is azuPf
Identifier: 86361239
GI number: 86361239
Start: 575423
End: 575866
Strand: Direct
Name: azuPf
Synonym: RHE_PF00510
Alternate gene names: 86361239
Gene position: 575423-575866 (Clockwise)
Preceding gene: 86361238
Following gene: 86361240
Centisome position: 89.56
GC content: 58.33
Gene sequence:
>444_bases ATGCGTTTGAAATTCGGTCTGATCGCTGCAACGGCAGCCTTGATTGTCTCGGCAGCGCCGTTGATGGCCGCCGACCACCA GGTTCAGATGCTCAACAAAGGCGCTGACGGCGCGATGGTGTTCGAACCCGGCTTCCTGAAAATCGCCCCCGGCGACACCG TCACCTTCATTCCCACCGACAAGAGCCACAATGTCGAGACTTTCATGGGGCTCATTCCAGACGGCGTTGCCGAATTCAAA TCCAAGCCGAACGAACAGTATCAGGCGAAATTCGATGTTCCGGGCGCCTATGTCCTGAAATGCACGCCTCATGCCGGCAT GGGCATGGTTGCCCTGATCCAGGTCGGCGACAGCCCGGCCAATCTCGACGCGATCAAGACCGCAAAGGTACCGAACATGG TGCGCAAGCGGCTCGATGCCGACCTCGCCAATATCACCCAGTGA
Upstream 100 bases:
>100_bases CTTTTTTCCCGAGTTTGACGGGCGTCAAAGAAGCCGGTTCCGGCATCTCTTAAAAGAAGTTCATGAGGCTGATAGAGCCT CTCAGAACAGGAGATTGCAA
Downstream 100 bases:
>100_bases TCAATGAAAGCTGCGGATGGCCGCGCTTGCGCGCCATCCCGCACATTGGAGAATAATCATGCTCAAGGCTATGGCCATTG CTTTCGTGGTGGTTGCCTGC
Product: pseudoazurin blue-copper protein
Products: NA
Alternate protein names: Blue copper protein [H]
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MRLKFGLIAATAALIVSAAPLMAADHQVQMLNKGADGAMVFEPGFLKIAPGDTVTFIPTDKSHNVETFMGLIPDGVAEFK SKPNEQYQAKFDVPGAYVLKCTPHAGMGMVALIQVGDSPANLDAIKTAKVPNMVRKRLDADLANITQ
Sequences:
>Translated_147_residues MRLKFGLIAATAALIVSAAPLMAADHQVQMLNKGADGAMVFEPGFLKIAPGDTVTFIPTDKSHNVETFMGLIPDGVAEFK SKPNEQYQAKFDVPGAYVLKCTPHAGMGMVALIQVGDSPANLDAIKTAKVPNMVRKRLDADLANITQ >Mature_147_residues MRLKFGLIAATAALIVSAAPLMAADHQVQMLNKGADGAMVFEPGFLKIAPGDTVTFIPTDKSHNVETFMGLIPDGVAEFK SKPNEQYQAKFDVPGAYVLKCTPHAGMGMVALIQVGDSPANLDAIKTAKVPNMVRKRLDADLANITQ
Specific function: This soluble electron transfer copper protein is required for the inactivation of copper-containing nitrite reductase in the presence of oxygen [H]
COG id: COG3794
COG function: function code C; Plastocyanin
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 plastocyanin-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002386 - InterPro: IPR000923 - InterPro: IPR001235 - InterPro: IPR008972 - InterPro: IPR012745 [H]
Pfam domain/function: PF00127 Copper-bind [H]
EC number: NA
Molecular weight: Translated: 15639; Mature: 15639
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLKFGLIAATAALIVSAAPLMAADHQVQMLNKGADGAMVFEPGFLKIAPGDTVTFIPTD CCEEHHHHHHHHHHHHHHCCHHHCCCHHEEECCCCCCEEEECCCEEEECCCCEEEEEECC KSHNVETFMGLIPDGVAEFKSKPNEQYQAKFDVPGAYVLKCTPHAGMGMVALIQVGDSPA CCCCHHHHHHHCCCCHHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCEEEEEEECCCCC NLDAIKTAKVPNMVRKRLDADLANITQ CCCHHHHHCCHHHHHHHHCCHHHHCCC >Mature Secondary Structure MRLKFGLIAATAALIVSAAPLMAADHQVQMLNKGADGAMVFEPGFLKIAPGDTVTFIPTD CCEEHHHHHHHHHHHHHHCCHHHCCCHHEEECCCCCCEEEECCCEEEECCCCEEEEEECC KSHNVETFMGLIPDGVAEFKSKPNEQYQAKFDVPGAYVLKCTPHAGMGMVALIQVGDSPA CCCCHHHHHHHCCCCHHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCEEEEEEECCCCC NLDAIKTAKVPNMVRKRLDADLANITQ CCCHHHHHCCHHHHHHHHCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8858582 [H]