| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is vbsP
Identifier: 86361185
GI number: 86361185
Start: 511806
End: 512525
Strand: Direct
Name: vbsP
Synonym: RHE_PF00455
Alternate gene names: 86361185
Gene position: 511806-512525 (Clockwise)
Preceding gene: 86361184
Following gene: 86361189
Centisome position: 79.66
GC content: 66.53
Gene sequence:
>720_bases ATGCAGCAATCAGACAACCAGCCGGCCGCCATCGATGTCGTGCTCTGGCAATATCCGCAGAACGGAAGCGATGGGGAGCG CTGGATACGGTCGCTGTCCTCGAATGAGCGAGAGCGCGCCGCGACCTATCGCTTCGAACGCGACCGGACCTCGTTCATCG CCGGCCGCTATCTGCTGCGGCAAGTGCTGAGCGCGCATACCGAAACGCGGCCTGACAAGGTCGTGTTGCTGGCGGATGCG CACGGCAAGCTGGCGGTCGAGGGCGGCGACACGCTGCAGTTCAGCCTTTCCAATGCCGACGGGCTGGTGGCGGTCGCCGT CGCTTCGGAATGCGCGCGCGTCGGGATCGACTGTGAACGCGCTGATGCCGAGGTCGAAGCGGCGGCGGTGGAGAGCTATT GCAGTCCGGACGAACGGCGGTGGCTCGATCAAGTGCCTGCGGGCGAACGGCCGCGTGCGGCCGTTGCCCTTTGGACGCTG AAGGAGAGCCATCTCAAGGCGCTCGGGGTGGGCTTGCGCGGGGATGCCCGCAGCGTCGCCTTTTCCTGGCAGGACGGCAT CCCCGTTCTGGTTCACAGCGGCGAACCGGACCGGCAATGGCATCACCGCCTGGTCGAGAGCGGCAGCCAGCACGTCGTCG CACTGGCCGCCCGCTCATCATCCGCCGCGCCCGGCATTCATGTCCTGACGTTTCAGGACGAGAGCATGCCGTCCCCATAG
Upstream 100 bases:
>100_bases GCCATCGGTTCATCGAAGCCGCGGAGTAGGCCCCCTCGGCGATTGCGGACATAACCCGCTGCCCGATTGCCAATCGGGCA GCGGTACGCATACTGGCCGC
Downstream 100 bases:
>100_bases CCGACCCGGAGCTGATGCGGCATGGCGGAAGCTGCCTCCGTCGCCCAGACCAGCTGCGCATTGTCGGGTTCGGCATCGAA ATGCTGCCGGCCGAGAATCG
Product: phosphopantetheinyl transferase protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MQQSDNQPAAIDVVLWQYPQNGSDGERWIRSLSSNERERAATYRFERDRTSFIAGRYLLRQVLSAHTETRPDKVVLLADA HGKLAVEGGDTLQFSLSNADGLVAVAVASECARVGIDCERADAEVEAAAVESYCSPDERRWLDQVPAGERPRAAVALWTL KESHLKALGVGLRGDARSVAFSWQDGIPVLVHSGEPDRQWHHRLVESGSQHVVALAARSSSAAPGIHVLTFQDESMPSP
Sequences:
>Translated_239_residues MQQSDNQPAAIDVVLWQYPQNGSDGERWIRSLSSNERERAATYRFERDRTSFIAGRYLLRQVLSAHTETRPDKVVLLADA HGKLAVEGGDTLQFSLSNADGLVAVAVASECARVGIDCERADAEVEAAAVESYCSPDERRWLDQVPAGERPRAAVALWTL KESHLKALGVGLRGDARSVAFSWQDGIPVLVHSGEPDRQWHHRLVESGSQHVVALAARSSSAAPGIHVLTFQDESMPSP >Mature_239_residues MQQSDNQPAAIDVVLWQYPQNGSDGERWIRSLSSNERERAATYRFERDRTSFIAGRYLLRQVLSAHTETRPDKVVLLADA HGKLAVEGGDTLQFSLSNADGLVAVAVASECARVGIDCERADAEVEAAAVESYCSPDERRWLDQVPAGERPRAAVALWTL KESHLKALGVGLRGDARSVAFSWQDGIPVLVHSGEPDRQWHHRLVESGSQHVVALAARSSSAAPGIHVLTFQDESMPSP
Specific function: Probably activates the acyl carrier protein (ACP) domain of hetM, by transferring the 4'-phosphopantetheinyl moiety of coenzyme A (CoA) to a serine residue. May be required for maintaining vegetative growth and probably acts via hetN to inhibit differenti
COG id: COG2091
COG function: function code H; Phosphopantetheinyl transferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the P-Pant transferase superfamily. Gsp/sfp/hetI/acpT family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008278 [H]
Pfam domain/function: PF01648 ACPS [H]
EC number: NA
Molecular weight: Translated: 26147; Mature: 26147
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQSDNQPAAIDVVLWQYPQNGSDGERWIRSLSSNERERAATYRFERDRTSFIAGRYLLR CCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHEECCCHHHHHHHHHHHH QVLSAHTETRPDKVVLLADAHGKLAVEGGDTLQFSLSNADGLVAVAVASECARVGIDCER HHHHHHCCCCCCEEEEEEECCCEEEEECCCEEEEEECCCCCEEEEEEHHHHHHCCCCCCC ADAEVEAAAVESYCSPDERRWLDQVPAGERPRAAVALWTLKESHLKALGVGLRGDARSVA CCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEEEECHHHHHHHCCCCCCCCCEEE FSWQDGIPVLVHSGEPDRQWHHRLVESGSQHVVALAARSSSAAPGIHVLTFQDESMPSP EEECCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCC >Mature Secondary Structure MQQSDNQPAAIDVVLWQYPQNGSDGERWIRSLSSNERERAATYRFERDRTSFIAGRYLLR CCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHEECCCHHHHHHHHHHHH QVLSAHTETRPDKVVLLADAHGKLAVEGGDTLQFSLSNADGLVAVAVASECARVGIDCER HHHHHHCCCCCCEEEEEEECCCEEEEECCCEEEEEECCCCCEEEEEEHHHHHHCCCCCCC ADAEVEAAAVESYCSPDERRWLDQVPAGERPRAAVALWTLKESHLKALGVGLRGDARSVA CCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEEEECHHHHHHHCCCCCCCCCEEE FSWQDGIPVLVHSGEPDRQWHHRLVESGSQHVVALAARSSSAAPGIHVLTFQDESMPSP EEECCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8157596; 11759840; 8939709 [H]