| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is proI [H]
Identifier: 86361160
GI number: 86361160
Start: 482866
End: 483648
Strand: Direct
Name: proI [H]
Synonym: RHE_PF00430
Alternate gene names: 86361160
Gene position: 482866-483648 (Clockwise)
Preceding gene: 86361159
Following gene: 86361161
Centisome position: 75.15
GC content: 64.75
Gene sequence:
>783_bases ATGATCAACAGCATTGGATTCGTCGGCACCGGCGCGATCACCGAAGCGATGGTTCGCGGGCTTCTGGCCGCACCGGCCTA CGCCTCCGAGATCCACGTATCGCCGCGGAGCGCACACATTGCCGCGACATTGGCCCAGGAGTTCGCCGCCGTCAGGATTG CCGGGGACAACCAGACTGTCGTCGATCGCAGCGACATGGTGTTCCTGGCGATCCGGCCGCAGATCGCCGAGGAGGTCGTA CGGGCGCTTTCGTTCAGAACCGGCCAGGTGGTCGTCAGCCTCGTAGCCGCGACCGAGCGCCAGGCTCTTCTCGATTGGAT CGGCACCGACGTGCACCTCGTCCAGGCCATCCCCCTGCCTTTCGTTGCGCAGCGGCAAGGCGTCACCGCCATCCTCCCGC CGGATGCCGCCGTCGCGGCGCTGTTCGATACGCTCGGAACCGCCGTCCAGTGCCAGTCGAGAAAGGAATATGATCTGCTC GCGGCGGCGAGCGCACTGATGTCGACCTATTTCGGCATCATGGAAACCACAGCCGTCTGGCTGGAAAAAAGCGGCCTGGA AAGGCCGAAAGCAAATGCCTACATCGCGCCGCTTTTCGCAAGCCTGGCGCAGAAGGCCAACAGCCCAGGCACCGAGCCGT TCAGCGCGCTAAGCCGCGAATTCGCCACCAAGGGCGGATTGAACGAGCAGGTTCTCTCCGACGTTGACAAGAAGGGCGGC CTCGCTGCGCTGACCGCGGCACTCGACGGTGTGCTCGCCCGCATCGAGGGCCGCAGCGACTGA
Upstream 100 bases:
>100_bases CATACGCGCCAGTTCCAGGATAATTTCATCAACTTCATGCGCGAGAACTACACGACGGATGTCGCGCTGGGACCGCTGCG AGCTGCGGAGTAACGACGTG
Downstream 100 bases:
>100_bases AGCGCATGCACCCTAAGCGAATATCCCTTACCGTCCTTTTCACAGTCGCCGCGATTTTGGGCCAGGCGATTTTAGCCCGC GCCGAACCGGTGGAGCGACC
Product: pyrroline-5-carboxylate reductase
Products: NA
Alternate protein names: P5C reductase 2; P5CR 2 [H]
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MINSIGFVGTGAITEAMVRGLLAAPAYASEIHVSPRSAHIAATLAQEFAAVRIAGDNQTVVDRSDMVFLAIRPQIAEEVV RALSFRTGQVVVSLVAATERQALLDWIGTDVHLVQAIPLPFVAQRQGVTAILPPDAAVAALFDTLGTAVQCQSRKEYDLL AAASALMSTYFGIMETTAVWLEKSGLERPKANAYIAPLFASLAQKANSPGTEPFSALSREFATKGGLNEQVLSDVDKKGG LAALTAALDGVLARIEGRSD
Sequences:
>Translated_260_residues MINSIGFVGTGAITEAMVRGLLAAPAYASEIHVSPRSAHIAATLAQEFAAVRIAGDNQTVVDRSDMVFLAIRPQIAEEVV RALSFRTGQVVVSLVAATERQALLDWIGTDVHLVQAIPLPFVAQRQGVTAILPPDAAVAALFDTLGTAVQCQSRKEYDLL AAASALMSTYFGIMETTAVWLEKSGLERPKANAYIAPLFASLAQKANSPGTEPFSALSREFATKGGLNEQVLSDVDKKGG LAALTAALDGVLARIEGRSD >Mature_260_residues MINSIGFVGTGAITEAMVRGLLAAPAYASEIHVSPRSAHIAATLAQEFAAVRIAGDNQTVVDRSDMVFLAIRPQIAEEVV RALSFRTGQVVVSLVAATERQALLDWIGTDVHLVQAIPLPFVAQRQGVTAILPPDAAVAALFDTLGTAVQCQSRKEYDLL AAASALMSTYFGIMETTAVWLEKSGLERPKANAYIAPLFASLAQKANSPGTEPFSALSREFATKGGLNEQVLSDVDKKGG LAALTAALDGVLARIEGRSD
Specific function: Proline biosynthesis; third (last) step. [C]
COG id: COG0345
COG function: function code E; Pyrroline-5-carboxylate reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyrroline-5-carboxylate reductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR004455 - InterPro: IPR000304 [H]
Pfam domain/function: PF03807 F420_oxidored [H]
EC number: =1.5.1.2 [H]
Molecular weight: Translated: 27378; Mature: 27378
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINSIGFVGTGAITEAMVRGLLAAPAYASEIHVSPRSAHIAATLAQEFAAVRIAGDNQTV CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHEECCCCHHHHHHHHHHHHHEEEECCCCCEE VDRSDMVFLAIRPQIAEEVVRALSFRTGQVVVSLVAATERQALLDWIGTDVHLVQAIPLP EECCCEEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHCCCC FVAQRQGVTAILPPDAAVAALFDTLGTAVQCQSRKEYDLLAAASALMSTYFGIMETTAVW HHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LEKSGLERPKANAYIAPLFASLAQKANSPGTEPFSALSREFATKGGLNEQVLSDVDKKGG HHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCC LAALTAALDGVLARIEGRSD HHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MINSIGFVGTGAITEAMVRGLLAAPAYASEIHVSPRSAHIAATLAQEFAAVRIAGDNQTV CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHEECCCCHHHHHHHHHHHHHEEEECCCCCEE VDRSDMVFLAIRPQIAEEVVRALSFRTGQVVVSLVAATERQALLDWIGTDVHLVQAIPLP EECCCEEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHCCCC FVAQRQGVTAILPPDAAVAALFDTLGTAVQCQSRKEYDLLAAASALMSTYFGIMETTAVW HHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LEKSGLERPKANAYIAPLFASLAQKANSPGTEPFSALSREFATKGGLNEQVLSDVDKKGG HHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCC LAALTAALDGVLARIEGRSD HHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 11418582 [H]