| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86361052
Identifier: 86361052
GI number: 86361052
Start: 361607
End: 363457
Strand: Direct
Name: 86361052
Synonym: RHE_PF00322
Alternate gene names: NA
Gene position: 361607-363457 (Clockwise)
Preceding gene: 86361051
Following gene: 86361059
Centisome position: 56.28
GC content: 63.48
Gene sequence:
>1851_bases ATGATCTACGATCCCAGCAGGGCCAACCCACTTTCCGGCAATCCCCTGAAGACGCGCGACGATCTGGCAAAAGCCGTCAT CGACCTTTTCGAGCCGCTCCTGCCCTATTTTTCCGAAGGCGGCGCCCGCGTCCGCCTCGGCGCTGCCGGCGCGATCTTCG ACCGGGCGGCGGCGGATCTCGAAGGTTATGCGCGGCCGCTCTGGGGCATCGTTCCCCTTGCTGCCGGCGGCGGCCACTTC CCGCATTGGAACCTCTATCGACGCGGACTGGCGAATGGGACCAATCCTGCGCATCCCGAATATTGCGGCGATTTGGCCGA CCGTAATCAGCGGCTGGTCGAGCTCGCCGCCGTCGGTTTCGCCCTGGCGCTGGTGCCCGAACACATCTGGGAACCGTTGA GCGATGGCGAAAAAAGGACCGTCGCCGCCTATCTTCTTGCAGCGCGCGAACTGGAATTCATCGACAACAACTGGAAATTC TTCCGCGTCCTGATCGACCTCGGACTGGAGCGCGTCGGTGTCGCTTTCGACATGGCGAAAACCGCCGCCTATCTCGATGA ATTGGAAGCTTTCGACATCGGCGAAGGCTGGTATCGTGACGGACCAGTCCGGCGGGTCGACCACTACATTCCCTTCGCCA TGCATTTCTATGGCCTGATCTACACGGTACTGGCGCGCGGCGACGAGGCGCGAAAGAACCGGTTCCGCGATCGCGCCGAA ATCTTCGCCCGGGATATCCGCCACTGGTTCGGCCCCGATGGCGCCGCCCTTGCCTTCGGCCGCAGCCAGACCTACCGCTT CGCGGCCGGCGGCTTCTGGGGGGCCCTTGCCTTTGCCGGCCTCGAAGCGCTGCCCTGGGCCGAGGTCAAGGGCTATTACA TGCGCCATATCCGCTGGTGGTCGGCATTGCCGATCGCCGACCGCGACGGCGTTCTCGCGATCGGCTACGGCTATCCGAAC CTGCTGATGAGCGAGAGCTACAACTCGCCCGGCTCACCCTATTGGGCGCTGAAATTCTTCCTGCCGCTCGCTCTTCCTCA GGACCATTCGTTCTGGACCGCCGAAGAGGCGCCGCAGCCGGATTTCCCCGAGCCGGTGGCACTGAAGCCGGCCGGCATGG TCGCCATGCACACGCCGGGAAATGTGGTCGTGTTTTCCTCCGGCCAGCAACACGACAAGATGCGCGGCGCAAACGAGAAA TATTCGAAATTTGTCTATTCCACCCGCTACGCCTTCAACATCGAGGCCGACGACCGGAACTTTGCCGCCGCCAGCTTCGA CGGCATGCTCGGCCTTTCCGACGATGGGGTCCACTTCCGCATGCGCGAAACCCTCGAAGAAGCGCTGATGGCGGGCGACC GGCTCTACTCGCGCTGGCGCCCCTGGCAGGACGTCAGCATCGAGACATGGCTCATTCCCGCAAAGCCCTGGCACATCCGC ATTCACCGCATATCCACGCCGCGTGCGCTCAGCACCATAGAGGGTGGTTTTGCGATCGAACGCGCCGATTTCAATGCCGA TCGATCCGAACAGGGCGAAGGCAGGGCCGTCTGGTACGGGCAGACCGATGTCAGCGGGATCGTCGACCTATCGCCGAACC TGAGGGCCGGCCACGCCATGAGCCCGATCCCAAACACCAACCTGATCCACGCCAAGACCTTGCTGCCACAGCTGCGCGGA GAAATCGGCCCTGGCACCACTGTGCTCGTGACGGCCGCGATGGCGCTGCCCAACTGGGCGGATTGGGCAGAGGCACTGGG AAATCCGCCGGCATGCCCGGATCTTGAGGAGGTGGAGCGAGATATCGGCGAGAACGGCGTTCGTGTGCCGGCCTTTGCTC TTCGGCCGTAG
Upstream 100 bases:
>100_bases CGAAGGCGTGAAGGCCATCAAGTAAGTCTCGCGAGATACCGGCGGCCGCGGACCAGCACATGGCCGCGGCCGACCTGTTT TAGAAAAATCAGAGCAGACA
Downstream 100 bases:
>100_bases GTGCTTGAAGGGTAAGAGACAGGGATAGCAGAAGTCAGAGGACTTTCGGTCCGTCAGCGATGTGCTTGTCATTCAAAAGT CGGCATCTAGATGACTAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 616; Mature: 616
Protein sequence:
>616_residues MIYDPSRANPLSGNPLKTRDDLAKAVIDLFEPLLPYFSEGGARVRLGAAGAIFDRAAADLEGYARPLWGIVPLAAGGGHF PHWNLYRRGLANGTNPAHPEYCGDLADRNQRLVELAAVGFALALVPEHIWEPLSDGEKRTVAAYLLAARELEFIDNNWKF FRVLIDLGLERVGVAFDMAKTAAYLDELEAFDIGEGWYRDGPVRRVDHYIPFAMHFYGLIYTVLARGDEARKNRFRDRAE IFARDIRHWFGPDGAALAFGRSQTYRFAAGGFWGALAFAGLEALPWAEVKGYYMRHIRWWSALPIADRDGVLAIGYGYPN LLMSESYNSPGSPYWALKFFLPLALPQDHSFWTAEEAPQPDFPEPVALKPAGMVAMHTPGNVVVFSSGQQHDKMRGANEK YSKFVYSTRYAFNIEADDRNFAAASFDGMLGLSDDGVHFRMRETLEEALMAGDRLYSRWRPWQDVSIETWLIPAKPWHIR IHRISTPRALSTIEGGFAIERADFNADRSEQGEGRAVWYGQTDVSGIVDLSPNLRAGHAMSPIPNTNLIHAKTLLPQLRG EIGPGTTVLVTAAMALPNWADWAEALGNPPACPDLEEVERDIGENGVRVPAFALRP
Sequences:
>Translated_616_residues MIYDPSRANPLSGNPLKTRDDLAKAVIDLFEPLLPYFSEGGARVRLGAAGAIFDRAAADLEGYARPLWGIVPLAAGGGHF PHWNLYRRGLANGTNPAHPEYCGDLADRNQRLVELAAVGFALALVPEHIWEPLSDGEKRTVAAYLLAARELEFIDNNWKF FRVLIDLGLERVGVAFDMAKTAAYLDELEAFDIGEGWYRDGPVRRVDHYIPFAMHFYGLIYTVLARGDEARKNRFRDRAE IFARDIRHWFGPDGAALAFGRSQTYRFAAGGFWGALAFAGLEALPWAEVKGYYMRHIRWWSALPIADRDGVLAIGYGYPN LLMSESYNSPGSPYWALKFFLPLALPQDHSFWTAEEAPQPDFPEPVALKPAGMVAMHTPGNVVVFSSGQQHDKMRGANEK YSKFVYSTRYAFNIEADDRNFAAASFDGMLGLSDDGVHFRMRETLEEALMAGDRLYSRWRPWQDVSIETWLIPAKPWHIR IHRISTPRALSTIEGGFAIERADFNADRSEQGEGRAVWYGQTDVSGIVDLSPNLRAGHAMSPIPNTNLIHAKTLLPQLRG EIGPGTTVLVTAAMALPNWADWAEALGNPPACPDLEEVERDIGENGVRVPAFALRP >Mature_616_residues MIYDPSRANPLSGNPLKTRDDLAKAVIDLFEPLLPYFSEGGARVRLGAAGAIFDRAAADLEGYARPLWGIVPLAAGGGHF PHWNLYRRGLANGTNPAHPEYCGDLADRNQRLVELAAVGFALALVPEHIWEPLSDGEKRTVAAYLLAARELEFIDNNWKF FRVLIDLGLERVGVAFDMAKTAAYLDELEAFDIGEGWYRDGPVRRVDHYIPFAMHFYGLIYTVLARGDEARKNRFRDRAE IFARDIRHWFGPDGAALAFGRSQTYRFAAGGFWGALAFAGLEALPWAEVKGYYMRHIRWWSALPIADRDGVLAIGYGYPN LLMSESYNSPGSPYWALKFFLPLALPQDHSFWTAEEAPQPDFPEPVALKPAGMVAMHTPGNVVVFSSGQQHDKMRGANEK YSKFVYSTRYAFNIEADDRNFAAASFDGMLGLSDDGVHFRMRETLEEALMAGDRLYSRWRPWQDVSIETWLIPAKPWHIR IHRISTPRALSTIEGGFAIERADFNADRSEQGEGRAVWYGQTDVSGIVDLSPNLRAGHAMSPIPNTNLIHAKTLLPQLRG EIGPGTTVLVTAAMALPNWADWAEALGNPPACPDLEEVERDIGENGVRVPAFALRP
Specific function: Unknown
COG id: COG4289
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68619; Mature: 68619
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYDPSRANPLSGNPLKTRDDLAKAVIDLFEPLLPYFSEGGARVRLGAAGAIFDRAAADL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH EGYARPLWGIVPLAAGGGHFPHWNLYRRGLANGTNPAHPEYCGDLADRNQRLVELAAVGF HHHHCHHHHHEEECCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ALALVPEHIWEPLSDGEKRTVAAYLLAARELEFIDNNWKFFRVLIDLGLERVGVAFDMAK HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHH TAAYLDELEAFDIGEGWYRDGPVRRVDHYIPFAMHFYGLIYTVLARGDEARKNRFRDRAE HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IFARDIRHWFGPDGAALAFGRSQTYRFAAGGFWGALAFAGLEALPWAEVKGYYMRHIRWW HHHHHHHHHHCCCCCEEEECCCCCEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH SALPIADRDGVLAIGYGYPNLLMSESYNSPGSPYWALKFFLPLALPQDHSFWTAEEAPQP HCCCCCCCCCEEEEECCCCHHHHCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCC DFPEPVALKPAGMVAMHTPGNVVVFSSGQQHDKMRGANEKYSKFVYSTRYAFNIEADDRN CCCCCCEECCCCEEEEECCCCEEEECCCCCHHHHCCCCHHHHHHEEEEEEEEEEECCCCC FAAASFDGMLGLSDDGVHFRMRETLEEALMAGDRLYSRWRPWQDVSIETWLIPAKPWHIR EEEECCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEE IHRISTPRALSTIEGGFAIERADFNADRSEQGEGRAVWYGQTDVSGIVDLSPNLRAGHAM EEEECCCCHHHHCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCC SPIPNTNLIHAKTLLPQLRGEIGPGTTVLVTAAMALPNWADWAEALGNPPACPDLEEVER CCCCCCCEEHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHH DIGENGVRVPAFALRP HHCCCCCCCCEEECCC >Mature Secondary Structure MIYDPSRANPLSGNPLKTRDDLAKAVIDLFEPLLPYFSEGGARVRLGAAGAIFDRAAADL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH EGYARPLWGIVPLAAGGGHFPHWNLYRRGLANGTNPAHPEYCGDLADRNQRLVELAAVGF HHHHCHHHHHEEECCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ALALVPEHIWEPLSDGEKRTVAAYLLAARELEFIDNNWKFFRVLIDLGLERVGVAFDMAK HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHH TAAYLDELEAFDIGEGWYRDGPVRRVDHYIPFAMHFYGLIYTVLARGDEARKNRFRDRAE HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IFARDIRHWFGPDGAALAFGRSQTYRFAAGGFWGALAFAGLEALPWAEVKGYYMRHIRWW HHHHHHHHHHCCCCCEEEECCCCCEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH SALPIADRDGVLAIGYGYPNLLMSESYNSPGSPYWALKFFLPLALPQDHSFWTAEEAPQP HCCCCCCCCCEEEEECCCCHHHHCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCC DFPEPVALKPAGMVAMHTPGNVVVFSSGQQHDKMRGANEKYSKFVYSTRYAFNIEADDRN CCCCCCEECCCCEEEEECCCCEEEECCCCCHHHHCCCCHHHHHHEEEEEEEEEEECCCCC FAAASFDGMLGLSDDGVHFRMRETLEEALMAGDRLYSRWRPWQDVSIETWLIPAKPWHIR EEEECCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEE IHRISTPRALSTIEGGFAIERADFNADRSEQGEGRAVWYGQTDVSGIVDLSPNLRAGHAM EEEECCCCHHHHCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCC SPIPNTNLIHAKTLLPQLRGEIGPGTTVLVTAAMALPNWADWAEALGNPPACPDLEEVER CCCCCCCEEHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHH DIGENGVRVPAFALRP HHCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA