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The map label for this gene is nagC [C]

Identifier: 86361020

GI number: 86361020

Start: 322860

End: 324011

Strand: Direct

Name: nagC [C]

Synonym: RHE_PF00290

Alternate gene names: 86361020

Gene position: 322860-324011 (Clockwise)

Preceding gene: 86361018

Following gene: 86361027

Centisome position: 50.25

GC content: 61.55

Gene sequence:

>1152_bases
ATGAAGTACGCTCCGCTGGACCACGTCGCCCCACACTTCCTGCGAGACACAGAGCCCGCGAGAGTAGCCTCCCGTAACGA
ACGGGACCTTTTGCGGTTGATCTGGAAGTCGCCCGGCATCGAGCGCTCCAGCCTGACCGATCCACTCGATCTCACCCAGC
AATCGCTGCACAGAATCGTCGGCCGGCTTCATGATCGGGGAATGGTCGCCTTTTCCCAATCGGAAAACCGGCGCCCCGGT
CCACCAAGCCCGGAGCTGACACTGCGAAGGGAGTGGTGTCTGACGCTCGGCATCTCCATCAATGTCGGAACGATTGGCCT
TTGCCTCATGGGTTTCGGCGAACCATTGGACAAAATGGAAATTCCCCAGGCCGGCTCGTCGCTATCCCTTGAAATGGAGC
GGATCGAAGCAGCGGTCGAACAGATCCTCGCCCGGCGCAGCGCCAAGCGGCGCGACATCCTCGGCGTCGGCCTCGCAGTC
TCCGGCCATCGCATGCTGGATACGGCTTTCAATTGTCCCCTGCCGCTCGCCCATTGGTCGCTGATCGACCTGGCGCCATT
GCTTGGGGAGCGGCTTGGCCTGCCGGTCTGGGCAGACAATGTCGCCAGGACTGCGGCCTTGGCGGAAGCAATTTTCGGCG
TCGGGCGTGACGTTGCCGATTTTGCCTATATCGCCCACCTTCATGGCTATGGCGGCGGCCTTGTCTCCGGCGGCATGCCG
TTTCGCGGCAGTTTCGGAAATGCCGGCGAAATCTCCGTTCTCTTCGGGCGTCAGGACTACGACGATCGCCCCGCTCTCAA
CCAGCTGCTCGAACATCTTCGCGCCAAAGGGCGCGTGGGCCTGACCCTGAGGGATCTGAAGAACGAAAATCTAGTGGAGT
GGGACGGTGTCGAGGAATGGATCGACCGCGTCACTCCGGCCCACAACCGAGCCATCAATGCGATCTGCGCGATCTTCGAC
CCGGCATTGATCGTGCTTGGCGGCGAGCTTCCACATTCACTTGCGAGAATGCTGATCGAACGCACCGAATTCAACAATCT
GCCTCGGCATGGCGCATTGCGCGACGTTCCGGGGCTGGCCGTGGCGAATATCATCGACGCCCCCGGCGCGATCGGCGCAG
CCCTGATCCCGCTCTTCGAAACTGTTCTGTGA

Upstream 100 bases:

>100_bases
GCAGGACCGGCAAAACCACGGATGATTTCGTTGCCCCGCAGAAGCAAAGCGTCCCCTCCACCTGCTTCACACCTACAGTG
TAAATCAATATGTTTGGAAA

Downstream 100 bases:

>100_bases
TCGCGGCTCAGGCAGCCAACCCGCCCCGCTTCCCTCTAAAGAGGACTGAAGCGCACCGCAGGACCAGGTGCGGTGCGCTT
CAGCTGGCGCGAGATGGGAA

Product: ROK family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MKYAPLDHVAPHFLRDTEPARVASRNERDLLRLIWKSPGIERSSLTDPLDLTQQSLHRIVGRLHDRGMVAFSQSENRRPG
PPSPELTLRREWCLTLGISINVGTIGLCLMGFGEPLDKMEIPQAGSSLSLEMERIEAAVEQILARRSAKRRDILGVGLAV
SGHRMLDTAFNCPLPLAHWSLIDLAPLLGERLGLPVWADNVARTAALAEAIFGVGRDVADFAYIAHLHGYGGGLVSGGMP
FRGSFGNAGEISVLFGRQDYDDRPALNQLLEHLRAKGRVGLTLRDLKNENLVEWDGVEEWIDRVTPAHNRAINAICAIFD
PALIVLGGELPHSLARMLIERTEFNNLPRHGALRDVPGLAVANIIDAPGAIGAALIPLFETVL

Sequences:

>Translated_383_residues
MKYAPLDHVAPHFLRDTEPARVASRNERDLLRLIWKSPGIERSSLTDPLDLTQQSLHRIVGRLHDRGMVAFSQSENRRPG
PPSPELTLRREWCLTLGISINVGTIGLCLMGFGEPLDKMEIPQAGSSLSLEMERIEAAVEQILARRSAKRRDILGVGLAV
SGHRMLDTAFNCPLPLAHWSLIDLAPLLGERLGLPVWADNVARTAALAEAIFGVGRDVADFAYIAHLHGYGGGLVSGGMP
FRGSFGNAGEISVLFGRQDYDDRPALNQLLEHLRAKGRVGLTLRDLKNENLVEWDGVEEWIDRVTPAHNRAINAICAIFD
PALIVLGGELPHSLARMLIERTEFNNLPRHGALRDVPGLAVANIIDAPGAIGAALIPLFETVL
>Mature_383_residues
MKYAPLDHVAPHFLRDTEPARVASRNERDLLRLIWKSPGIERSSLTDPLDLTQQSLHRIVGRLHDRGMVAFSQSENRRPG
PPSPELTLRREWCLTLGISINVGTIGLCLMGFGEPLDKMEIPQAGSSLSLEMERIEAAVEQILARRSAKRRDILGVGLAV
SGHRMLDTAFNCPLPLAHWSLIDLAPLLGERLGLPVWADNVARTAALAEAIFGVGRDVADFAYIAHLHGYGGGLVSGGMP
FRGSFGNAGEISVLFGRQDYDDRPALNQLLEHLRAKGRVGLTLRDLKNENLVEWDGVEEWIDRVTPAHNRAINAICAIFD
PALIVLGGELPHSLARMLIERTEFNNLPRHGALRDVPGLAVANIIDAPGAIGAALIPLFETVL

Specific function: Acts As A Repressor Of The Nagebacd Operon And Acts Both As An Activator And A Repressor For The Transcription Of The Glmsu Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600
- InterPro:   IPR018335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 41899; Mature: 41899

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYAPLDHVAPHFLRDTEPARVASRNERDLLRLIWKSPGIERSSLTDPLDLTQQSLHRIV
CCCCCCHHHCHHHHCCCCCHHHHCCCHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHH
GRLHDRGMVAFSQSENRRPGPPSPELTLRREWCLTLGISINVGTIGLCLMGFGEPLDKME
HHHCCCCEEEECCCCCCCCCCCCCCEEEEEEEEEEEEEEECHHHHHHHHHHCCCCHHHCC
IPQAGSSLSLEMERIEAAVEQILARRSAKRRDILGVGLAVSGHRMLDTAFNCPLPLAHWS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHCCCCCCHHHHH
LIDLAPLLGERLGLPVWADNVARTAALAEAIFGVGRDVADFAYIAHLHGYGGGLVSGGMP
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCC
FRGSFGNAGEISVLFGRQDYDDRPALNQLLEHLRAKGRVGLTLRDLKNENLVEWDGVEEW
CCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHH
IDRVTPAHNRAINAICAIFDPALIVLGGELPHSLARMLIERTEFNNLPRHGALRDVPGLA
HHHCCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
VANIIDAPGAIGAALIPLFETVL
HHHHHCCCCHHHHHHHHHHHHHC
>Mature Secondary Structure
MKYAPLDHVAPHFLRDTEPARVASRNERDLLRLIWKSPGIERSSLTDPLDLTQQSLHRIV
CCCCCCHHHCHHHHCCCCCHHHHCCCHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHH
GRLHDRGMVAFSQSENRRPGPPSPELTLRREWCLTLGISINVGTIGLCLMGFGEPLDKME
HHHCCCCEEEECCCCCCCCCCCCCCEEEEEEEEEEEEEEECHHHHHHHHHHCCCCHHHCC
IPQAGSSLSLEMERIEAAVEQILARRSAKRRDILGVGLAVSGHRMLDTAFNCPLPLAHWS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHCCCCCCHHHHH
LIDLAPLLGERLGLPVWADNVARTAALAEAIFGVGRDVADFAYIAHLHGYGGGLVSGGMP
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCC
FRGSFGNAGEISVLFGRQDYDDRPALNQLLEHLRAKGRVGLTLRDLKNENLVEWDGVEEW
CCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHH
IDRVTPAHNRAINAICAIFDPALIVLGGELPHSLARMLIERTEFNNLPRHGALRDVPGLA
HHHCCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
VANIIDAPGAIGAALIPLFETVL
HHHHHCCCCHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]