| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86361010
Identifier: 86361010
GI number: 86361010
Start: 309524
End: 310297
Strand: Direct
Name: 86361010
Synonym: RHE_PF00280
Alternate gene names: NA
Gene position: 309524-310297 (Clockwise)
Preceding gene: 86361009
Following gene: 86361017
Centisome position: 48.17
GC content: 61.37
Gene sequence:
>774_bases GTGAAATTATTGGAGGGCGGGCGAACCGGGCAGATCTGGCGCGACGGCGATACCGTCATCAGACCATCAGGCGCATGGAC GCCGACCACGCACAGGTTCTTGCGCCATCTCAGAAGCAATGGCTTCCCGGCGGCTCCGCAGCCCATTCAAATTGCCGGCG ACGATCAGGAGGTCGTCAGCTACGTCGCCGGGCGCGTCTGCGAAGACCTCCGTGATCCCCTTGTCGGATCGGAGCGCATG CTGATTTCCGCAGCGAGACTTCTGCGCGATTTTCATACAGCATCTCAGGGCTTTCTGGAATCGGATGACGATGCTCAGAT ATGGATGCTGCCGGCGCAGGAGCCGCGTGAGATCGTCTGTCACGGAGACTTTGCGCCCTACAATGTCGCCACCGTCGATC AGGAGGCTGTCGGGATCATCGATTTCGACACTGCCCATCCCGCCCCGCGCCTCTGGGATCTCGCCTATGCGGTCTATCGC TGGGCCCCCCTCTCCGATCCTGCCAATCCCTCTGTGGCATTCGGTCTGGACGACCAACTGCGGCGGGCGAAAATCTTCTG CAACGCCTATGGCGCGACGATGGAAGAACGGCGGCAGCTTCCCGAGATGATCTGCAGGCGGCTTCGAGCCCTTGCCGATT TCATGTTGGCAAGGGCTGCGGCCGGCGACGAGACCTTCGCGGAAGACGTCGACGCGGGAGACGCCAGGCTGTATCTGAAC GACATCGGCTATATCGGCATACACCGAGATCGGCTGCTGAAAGCGCTGTCCTGA
Upstream 100 bases:
>100_bases TCGGACACGGCGGCGTTCTACCGGAACTGCCATGAAACGAACCTTGCCGCTACGGTTCAGGCCCATATCGAAAAACTGAA ATCTGCGTAGGAGGCCATGG
Downstream 100 bases:
>100_bases CTAAAGCCATTTTCGCCGGCGGAAGAAGCCGAAAAGGCTGAGGCACAGGACGGCGATGACGCCCAATACGACGAAATAGC CATACTGGAACTTCAATTCC
Product: hypothetical protein
Products: NA
Alternate protein names: Trifolitoxin Immunity Protein; Phosphotransferase; Phosphotransferase Family Protein; Kinase; Aminoglycoside Phosphotransferase Protein; Truncated Trifolitoxin Immunity Protein; TfxG-Like Immunity Protein Against TfxA-Like Peptides; TfxG-Like Protein; Homoserine Kinase Type II; Transposase Related Protein; Antibiotic Resistance Protein
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MKLLEGGRTGQIWRDGDTVIRPSGAWTPTTHRFLRHLRSNGFPAAPQPIQIAGDDQEVVSYVAGRVCEDLRDPLVGSERM LISAARLLRDFHTASQGFLESDDDAQIWMLPAQEPREIVCHGDFAPYNVATVDQEAVGIIDFDTAHPAPRLWDLAYAVYR WAPLSDPANPSVAFGLDDQLRRAKIFCNAYGATMEERRQLPEMICRRLRALADFMLARAAAGDETFAEDVDAGDARLYLN DIGYIGIHRDRLLKALS
Sequences:
>Translated_257_residues MKLLEGGRTGQIWRDGDTVIRPSGAWTPTTHRFLRHLRSNGFPAAPQPIQIAGDDQEVVSYVAGRVCEDLRDPLVGSERM LISAARLLRDFHTASQGFLESDDDAQIWMLPAQEPREIVCHGDFAPYNVATVDQEAVGIIDFDTAHPAPRLWDLAYAVYR WAPLSDPANPSVAFGLDDQLRRAKIFCNAYGATMEERRQLPEMICRRLRALADFMLARAAAGDETFAEDVDAGDARLYLN DIGYIGIHRDRLLKALS >Mature_257_residues MKLLEGGRTGQIWRDGDTVIRPSGAWTPTTHRFLRHLRSNGFPAAPQPIQIAGDDQEVVSYVAGRVCEDLRDPLVGSERM LISAARLLRDFHTASQGFLESDDDAQIWMLPAQEPREIVCHGDFAPYNVATVDQEAVGIIDFDTAHPAPRLWDLAYAVYR WAPLSDPANPSVAFGLDDQLRRAKIFCNAYGATMEERRQLPEMICRRLRALADFMLARAAAGDETFAEDVDAGDARLYLN DIGYIGIHRDRLLKALS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28696; Mature: 28696
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLEGGRTGQIWRDGDTVIRPSGAWTPTTHRFLRHLRSNGFPAAPQPIQIAGDDQEVVS CCCCCCCCCCCEEECCCCEECCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHH YVAGRVCEDLRDPLVGSERMLISAARLLRDFHTASQGFLESDDDAQIWMLPAQEPREIVC HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEE HGDFAPYNVATVDQEAVGIIDFDTAHPAPRLWDLAYAVYRWAPLSDPANPSVAFGLDDQL ECCCCCCEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCHHHH RRAKIFCNAYGATMEERRQLPEMICRRLRALADFMLARAAAGDETFAEDVDAGDARLYLN HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEE DIGYIGIHRDRLLKALS CCCEEEECHHHHHHHCC >Mature Secondary Structure MKLLEGGRTGQIWRDGDTVIRPSGAWTPTTHRFLRHLRSNGFPAAPQPIQIAGDDQEVVS CCCCCCCCCCCEEECCCCEECCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHH YVAGRVCEDLRDPLVGSERMLISAARLLRDFHTASQGFLESDDDAQIWMLPAQEPREIVC HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEE HGDFAPYNVATVDQEAVGIIDFDTAHPAPRLWDLAYAVYRWAPLSDPANPSVAFGLDDQL ECCCCCCEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCHHHH RRAKIFCNAYGATMEERRQLPEMICRRLRALADFMLARAAAGDETFAEDVDAGDARLYLN HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEE DIGYIGIHRDRLLKALS CCCEEEECHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA