| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86361009
Identifier: 86361009
GI number: 86361009
Start: 308632
End: 309513
Strand: Direct
Name: 86361009
Synonym: RHE_PF00279
Alternate gene names: NA
Gene position: 308632-309513 (Clockwise)
Preceding gene: 86361008
Following gene: 86361010
Centisome position: 48.03
GC content: 59.41
Gene sequence:
>882_bases ATGAACCCCGCGGTAGTATTGTGCTCCTATCCCGGACTTGACGAGCGCATCGTTGTCCTCCGGGCGGGAGACGAGGTCGA CGCCATGTTTGTGCGGACCCAGAGGTTCAATGTCCTGATCGATACGCTCGGCACGCCGGAACTGTGCCGGATGGCGCTGG ATCTGCTTGGGGACAGAGGCAAGGATCGCCCGCTGATCGTCGTCAATTCGCATATGGATTGGGATCATTTCTGGGGAAAC TCTGCGGTTTCAGGGCGTGCTCCGATCATCGCGCATGCCGCAGCGCTCGACCGTCTGCGTGATGCCTCCACGCAGCAGGT CCTGAAGGACAAGGCGAGACAGGAAACGCGGTTCGCGAATGTCGAGCTCGTCGGCCCGGATATCACCTTCTCCAGCTCGA TGGTCCTGAACGGCGGCGATCTGACGCTGGAACTCATTCATACGCCGGGCCACACGCCTGACCATATCGCCGTCTGGATT CCGGAACTCCGCGTCTGCCTGGCCGTCGACGCGGTGGAATATCCCATTCCCGAAGTTTGGAGCAGGAGAGCCGATGATCT TCGCCAGATCCGCTCCTCGCTCAGGCGGATCCGTGACCTTGATGCGAAACTGGTCATTCCTGCGCACGGCAGAACATCTT CGCCTTCGGCAGTGGATGAGAACCTTGTTTATTTCGAAGCCTTGGCCGTTCGTGTCGGCAGCCTGAGTGAAAGCCAGCTG GCTGACCCTCAACTCGGCGCTACACGTGGTTTCCGGCTTGAAGACGTCGTCGCCATTCCCGAAGGGATGCCTTCGGACAC GGCGGCGTTCTACCGGAACTGCCATGAAACGAACCTTGCCGCTACGGTTCAGGCCCATATCGAAAAACTGAAATCTGCGT AG
Upstream 100 bases:
>100_bases GCCGGTGAAGCAGAAATCGGGCAGCCCTTAAAGGCAGGCATCCAAACGAGACTTGATGCAGTGGCTAAAGTCAATGCAGT TGCAATGGAGGCAACAGGAC
Downstream 100 bases:
>100_bases GAGGCCATGGGTGAAATTATTGGAGGGCGGGCGAACCGGGCAGATCTGGCGCGACGGCGATACCGTCATCAGACCATCAG GCGCATGGACGCCGACCACG
Product: beta-lactamase-like domain-containing protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Beta-Lactamase-Like Domain-Containing Protein; Cyclase/Dehydrase; Cyclase; Beta-Lactamase Domain-Containing Protein
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MNPAVVLCSYPGLDERIVVLRAGDEVDAMFVRTQRFNVLIDTLGTPELCRMALDLLGDRGKDRPLIVVNSHMDWDHFWGN SAVSGRAPIIAHAAALDRLRDASTQQVLKDKARQETRFANVELVGPDITFSSSMVLNGGDLTLELIHTPGHTPDHIAVWI PELRVCLAVDAVEYPIPEVWSRRADDLRQIRSSLRRIRDLDAKLVIPAHGRTSSPSAVDENLVYFEALAVRVGSLSESQL ADPQLGATRGFRLEDVVAIPEGMPSDTAAFYRNCHETNLAATVQAHIEKLKSA
Sequences:
>Translated_293_residues MNPAVVLCSYPGLDERIVVLRAGDEVDAMFVRTQRFNVLIDTLGTPELCRMALDLLGDRGKDRPLIVVNSHMDWDHFWGN SAVSGRAPIIAHAAALDRLRDASTQQVLKDKARQETRFANVELVGPDITFSSSMVLNGGDLTLELIHTPGHTPDHIAVWI PELRVCLAVDAVEYPIPEVWSRRADDLRQIRSSLRRIRDLDAKLVIPAHGRTSSPSAVDENLVYFEALAVRVGSLSESQL ADPQLGATRGFRLEDVVAIPEGMPSDTAAFYRNCHETNLAATVQAHIEKLKSA >Mature_293_residues MNPAVVLCSYPGLDERIVVLRAGDEVDAMFVRTQRFNVLIDTLGTPELCRMALDLLGDRGKDRPLIVVNSHMDWDHFWGN SAVSGRAPIIAHAAALDRLRDASTQQVLKDKARQETRFANVELVGPDITFSSSMVLNGGDLTLELIHTPGHTPDHIAVWI PELRVCLAVDAVEYPIPEVWSRRADDLRQIRSSLRRIRDLDAKLVIPAHGRTSSPSAVDENLVYFEALAVRVGSLSESQL ADPQLGATRGFRLEDVVAIPEGMPSDTAAFYRNCHETNLAATVQAHIEKLKSA
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32316; Mature: 32316
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPAVVLCSYPGLDERIVVLRAGDEVDAMFVRTQRFNVLIDTLGTPELCRMALDLLGDRG CCCEEEEEECCCCCCEEEEEECCCCCEEEEEEHHHHEEEEECCCCHHHHHHHHHHHCCCC KDRPLIVVNSHMDWDHFWGNSAVSGRAPIIAHAAALDRLRDASTQQVLKDKARQETRFAN CCCCEEEEECCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCE VELVGPDITFSSSMVLNGGDLTLELIHTPGHTPDHIAVWIPELRVCLAVDAVEYPIPEVW EEEECCCCEECCCEEEECCCEEEEEEECCCCCCCEEEEEECHHEEHHHHHHHHCCCHHHH SRRADDLRQIRSSLRRIRDLDAKLVIPAHGRTSSPSAVDENLVYFEALAVRVGSLSESQL HCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHC ADPQLGATRGFRLEDVVAIPEGMPSDTAAFYRNCHETNLAATVQAHIEKLKSA CCCCCCCCCCCCHHEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MNPAVVLCSYPGLDERIVVLRAGDEVDAMFVRTQRFNVLIDTLGTPELCRMALDLLGDRG CCCEEEEEECCCCCCEEEEEECCCCCEEEEEEHHHHEEEEECCCCHHHHHHHHHHHCCCC KDRPLIVVNSHMDWDHFWGNSAVSGRAPIIAHAAALDRLRDASTQQVLKDKARQETRFAN CCCCEEEEECCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCE VELVGPDITFSSSMVLNGGDLTLELIHTPGHTPDHIAVWIPELRVCLAVDAVEYPIPEVW EEEECCCCEECCCEEEECCCEEEEEEECCCCCCCEEEEEECHHEEHHHHHHHHCCCHHHH SRRADDLRQIRSSLRRIRDLDAKLVIPAHGRTSSPSAVDENLVYFEALAVRVGSLSESQL HCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHC ADPQLGATRGFRLEDVVAIPEGMPSDTAAFYRNCHETNLAATVQAHIEKLKSA CCCCCCCCCCCCHHEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA