| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86360930
Identifier: 86360930
GI number: 86360930
Start: 210003
End: 210605
Strand: Direct
Name: 86360930
Synonym: RHE_PF00199
Alternate gene names: NA
Gene position: 210003-210605 (Clockwise)
Preceding gene: 86360920
Following gene: 86360931
Centisome position: 32.68
GC content: 59.04
Gene sequence:
>603_bases ATGACCCTCGGCATCAGAAAATTCACCACCTTCCTGGAAGAGACCCTCGTCGAAGGCGGCAGGGCAGCGTCACGCCCCGT CAATATCGTCGTGGTCGCAGCCGTGATCCAAAATCCCTGGGCCGGCCGCGGCTTTGTCGAAGATCTCAGGCCGGAGATCA TCCGCATTGCCGGGGAGCTCAGCCACGAAATGACCAATCGGCTGTTGCGCCAGATTGGCCCCGAGCAGATCGAGGCTTGT GGGAAAGCGGCGGCGGTCGGAATCAATGGCGAAATCGAGCATGCCTCGGCAATGATTCACACGTTGCGTTTCGGCAATCC TTTCCGCGAAGCGATCGGTGGCACGAACTATCTTGAATTTGCCAACACGCGCAATGCACCGGGGGCGCTCCTTTCCTTGC CGATGATGCACAAGAGCGAAAACGGCAAGCGATCGCATTTTCTGACTGCCAATTTCCAGATTGCCGATGCGCCTGGTCCT GACGAGATCATCGTGGCGATCGGCGCTTCGGATAGCGGTCGCGCCCATGCGCGCATCGCCGACCGCTTCCAGGATATCGC AGAGATGGAAGCGGAAAAGGCCGTGACGTTGTCGGGCATTTGA
Upstream 100 bases:
>100_bases TTCGCAGGATCTTTCCGCAAGCTCTTCCTTCGGACATAGGAAGAAATTTTCCAACGCCGCTGTAGCCTAGCGCAAGTTTT CATTTTTAGCGGTTTTTCAC
Downstream 100 bases:
>100_bases CGAGCGCAGCTGCTGATCTTGGGGAGGTGGGATGAAGCTCGACGCCATCGACCTGCGCATTCTTGACGCCGTCCAGCGCG ACGGCCGCATCACCAAACTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MTLGIRKFTTFLEETLVEGGRAASRPVNIVVVAAVIQNPWAGRGFVEDLRPEIIRIAGELSHEMTNRLLRQIGPEQIEAC GKAAAVGINGEIEHASAMIHTLRFGNPFREAIGGTNYLEFANTRNAPGALLSLPMMHKSENGKRSHFLTANFQIADAPGP DEIIVAIGASDSGRAHARIADRFQDIAEMEAEKAVTLSGI
Sequences:
>Translated_200_residues MTLGIRKFTTFLEETLVEGGRAASRPVNIVVVAAVIQNPWAGRGFVEDLRPEIIRIAGELSHEMTNRLLRQIGPEQIEAC GKAAAVGINGEIEHASAMIHTLRFGNPFREAIGGTNYLEFANTRNAPGALLSLPMMHKSENGKRSHFLTANFQIADAPGP DEIIVAIGASDSGRAHARIADRFQDIAEMEAEKAVTLSGI >Mature_199_residues TLGIRKFTTFLEETLVEGGRAASRPVNIVVVAAVIQNPWAGRGFVEDLRPEIIRIAGELSHEMTNRLLRQIGPEQIEACG KAAAVGINGEIEHASAMIHTLRFGNPFREAIGGTNYLEFANTRNAPGALLSLPMMHKSENGKRSHFLTANFQIADAPGPD EIIVAIGASDSGRAHARIADRFQDIAEMEAEKAVTLSGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21583; Mature: 21452
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLGIRKFTTFLEETLVEGGRAASRPVNIVVVAAVIQNPWAGRGFVEDLRPEIIRIAGEL CCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH SHEMTNRLLRQIGPEQIEACGKAAAVGINGEIEHASAMIHTLRFGNPFREAIGGTNYLEF HHHHHHHHHHHCCHHHHHHHCCCEEECCCCCHHHHHHHHHHHHCCCHHHHHCCCCCEEEE ANTRNAPGALLSLPMMHKSENGKRSHFLTANFQIADAPGPDEIIVAIGASDSGRAHARIA CCCCCCCCHHEECCHHHCCCCCCCCEEEEEEEEEECCCCCCEEEEEEECCCCCCHHHHHH DRFQDIAEMEAEKAVTLSGI HHHHHHHHHHHHHCEEECCC >Mature Secondary Structure TLGIRKFTTFLEETLVEGGRAASRPVNIVVVAAVIQNPWAGRGFVEDLRPEIIRIAGEL CCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH SHEMTNRLLRQIGPEQIEACGKAAAVGINGEIEHASAMIHTLRFGNPFREAIGGTNYLEF HHHHHHHHHHHCCHHHHHHHCCCEEECCCCCHHHHHHHHHHHHCCCHHHHHCCCCCEEEE ANTRNAPGALLSLPMMHKSENGKRSHFLTANFQIADAPGPDEIIVAIGASDSGRAHARIA CCCCCCCCHHEECCHHHCCCCCCCCEEEEEEEEEECCCCCCEEEEEEECCCCCCHHHHHH DRFQDIAEMEAEKAVTLSGI HHHHHHHHHHHHHCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA