| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86360813
Identifier: 86360813
GI number: 86360813
Start: 83866
End: 84222
Strand: Direct
Name: 86360813
Synonym: RHE_PF00080
Alternate gene names: NA
Gene position: 83866-84222 (Clockwise)
Preceding gene: 86360812
Following gene: 86360814
Centisome position: 13.05
GC content: 60.5
Gene sequence:
>357_bases ATGAAAACCAAGGTTGTCGTGGTCGAGGACGAGGCTCTGCTGCTGATGACGGCGGTCGCCATCGTCGAGGAGGCAGGCTT TGAAGCGCTTGAGGCACGCAATGCCGACGAGGCGATCATGCTCTTCGAAAGAGTGCCCGGCATCCGGATCCTGTTTACAG ATATCGACATGCCGGGCAGCATGGATGGCTTGATGCTCGCAAAGGCTGTCCGTGACCGCTGGCCGCCCGTCGAAATCATC ATCGTCTCCGGCATGAAGCAGCCGGACGCGGGCGCTTTGCCCGAGCGCGTCGTCTTCTTCTCCAAGCCCTACGATATCCG GCAGCTTACCAATGCGCTCGTCAGCATGGCCGCGTAG
Upstream 100 bases:
>100_bases ACCGAAGGCCTCATCTTCGAAGTAATATTTTCGATCGGGGAACCGGTTGCCAAAGGCGAAGTTGACCCTCTGAGCCGGAC GTAAAGCATACGAGCTAGAG
Downstream 100 bases:
>100_bases GACTTCGGCCCCGGCATAGGCTGCTCGACTGGAAATGACGCGCGATAATGCATCCTTTTGGAATCTCGCGCGTTTTGCCT GCTTCAACAGCAGGAGACCA
Product: putative two-component response regulator protein
Products: NA
Alternate protein names: Response Regulator Receiver; Response Regulator; Response Regulator Receiver Domain-Containing Protein; Two-Component Response Regulator Protein; PAS/PAC Sensor Hybrid Histidine Kinase; Two-Component Sensor Histidine Kinase Protein; Two Component Response Regulator; Histidine Kinase; Multi-Sensor Hybrid Histidine Kinase; PAS Sensor Protein; Chemotaxis Response Regulator; Two Component Sensor Kinase/Response Regulator Hybrid; Integral Membrane Sensor Hybrid Histidine Kinase; PAS Fold Family Protein
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MKTKVVVVEDEALLLMTAVAIVEEAGFEALEARNADEAIMLFERVPGIRILFTDIDMPGSMDGLMLAKAVRDRWPPVEII IVSGMKQPDAGALPERVVFFSKPYDIRQLTNALVSMAA
Sequences:
>Translated_118_residues MKTKVVVVEDEALLLMTAVAIVEEAGFEALEARNADEAIMLFERVPGIRILFTDIDMPGSMDGLMLAKAVRDRWPPVEII IVSGMKQPDAGALPERVVFFSKPYDIRQLTNALVSMAA >Mature_118_residues MKTKVVVVEDEALLLMTAVAIVEEAGFEALEARNADEAIMLFERVPGIRILFTDIDMPGSMDGLMLAKAVRDRWPPVEII IVSGMKQPDAGALPERVVFFSKPYDIRQLTNALVSMAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12976; Mature: 12976
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.8 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.8 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKVVVVEDEALLLMTAVAIVEEAGFEALEARNADEAIMLFERVPGIRILFTDIDMPGS CCCEEEEEECCHHHHHHHHHHHHHCCHHHHHHCCCCCEEHHHHHCCCEEEEEEECCCCCC MDGLMLAKAVRDRWPPVEIIIVSGMKQPDAGALPERVVFFSKPYDIRQLTNALVSMAA CCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCC >Mature Secondary Structure MKTKVVVVEDEALLLMTAVAIVEEAGFEALEARNADEAIMLFERVPGIRILFTDIDMPGS CCCEEEEEECCHHHHHHHHHHHHHCCHHHHHHCCCCCEEHHHHHCCCEEEEEEECCCCCC MDGLMLAKAVRDRWPPVEIIIVSGMKQPDAGALPERVVFFSKPYDIRQLTNALVSMAA CCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA