| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
Click here to switch to the map view.
The map label for this gene is 86360807
Identifier: 86360807
GI number: 86360807
Start: 73942
End: 74334
Strand: Direct
Name: 86360807
Synonym: RHE_PF00074
Alternate gene names: NA
Gene position: 73942-74334 (Clockwise)
Preceding gene: 86360806
Following gene: 86360808
Centisome position: 11.51
GC content: 54.71
Gene sequence:
>393_bases GTGGAAAAAGGCAATTACACGAAACTCTTCTCGGGGAAGCGTATCCTGATTGTTGAGGACGAGTATTTTCTTGCCGACGA CACCCGCCGGCAATTGGAGGATTTCGGCGCGACGGTCATTGGCCCTGCGGCGAATGTTGGCCGCGCGCTTGACCTTATCA ATCGCGAACACGTCGATGCGGCGATCCTGGACGTCTTTCTTGGCGACGAGCTGGTTTTTGCTGTCTCCGATGAACTGGAG GAACGAGAAATCAACTTTGTCTTTGCTACCGGCTACGACCGGTCATACATCCCCGCAAAGTATCAAGGGTTTGCGCTCTG CGAAAAACCGACCGAGCTCGAAAAGATCGCCGTCGCGCTCTTTGGCCGGTCAGGTTCCGAACGGCTGAATTGA
Upstream 100 bases:
>100_bases ATGAACAAGAGCTGCTGACGGTCCTGGCTGGTCTGCCGGTACGGCGGCGGCCTGGGCTCCATCGCTCTATTTGATCTCTG GCCCGATTGGAAAGAACCCA
Downstream 100 bases:
>100_bases TCACCGTAGCCGCGCCCGGGTGCATTCAGCTACGAGCGTCAATTCCGGGTGGATTTGCCGCCCGGCGGAACCAACGGGCT TGTCGGCTGTTGAACCTGAA
Product: putative two-component response regulator protein
Products: NA
Alternate protein names: Response Regulator Receiver; Two-Component Response Regulator Protein; Signal Transduction Histidine Kinase; Regulatory Protein; CheY-Like Response Regulator; Response Regulator Receiver And SARP Domain Protein; Two Component Response Regulator; Two-Component System Regulatory Protein; Two-Component Response Regulator; PAS Sensor Protein; Response Regulator Receiver Protein ExsF; Response Regulator Receiver Domain; Response Regulator; Response Regulator Receiver Modulated GAF Sensor Protein; Response Regulator Recevier Domain Protein; Two-Component Receiver Domain-Containing Protein; Crp/Fnr Family Transcriptional Regulator; Bacteriophytochrome; Response Regulator/Sensor Histidine Kinase; Two-Component System Response Regulator
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MEKGNYTKLFSGKRILIVEDEYFLADDTRRQLEDFGATVIGPAANVGRALDLINREHVDAAILDVFLGDELVFAVSDELE EREINFVFATGYDRSYIPAKYQGFALCEKPTELEKIAVALFGRSGSERLN
Sequences:
>Translated_130_residues MEKGNYTKLFSGKRILIVEDEYFLADDTRRQLEDFGATVIGPAANVGRALDLINREHVDAAILDVFLGDELVFAVSDELE EREINFVFATGYDRSYIPAKYQGFALCEKPTELEKIAVALFGRSGSERLN >Mature_130_residues MEKGNYTKLFSGKRILIVEDEYFLADDTRRQLEDFGATVIGPAANVGRALDLINREHVDAAILDVFLGDELVFAVSDELE EREINFVFATGYDRSYIPAKYQGFALCEKPTELEKIAVALFGRSGSERLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14599; Mature: 14599
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKGNYTKLFSGKRILIVEDEYFLADDTRRQLEDFGATVIGPAANVGRALDLINREHVDA CCCCCEEEEECCCEEEEEECCEEECCCHHHHHHHCCCEEECCCCHHHHHHHHHCCCCHHH AILDVFLGDELVFAVSDELEEREINFVFATGYDRSYIPAKYQGFALCEKPTELEKIAVAL HHHHHHHCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHE FGRSGSERLN ECCCCCCCCC >Mature Secondary Structure MEKGNYTKLFSGKRILIVEDEYFLADDTRRQLEDFGATVIGPAANVGRALDLINREHVDA CCCCCEEEEECCCEEEEEECCEEECCCHHHHHHHCCCEEECCCCHHHHHHHHHCCCCHHH AILDVFLGDELVFAVSDELEEREINFVFATGYDRSYIPAKYQGFALCEKPTELEKIAVAL HHHHHHHCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHE FGRSGSERLN ECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA