Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

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The map label for this gene is 86360793

Identifier: 86360793

GI number: 86360793

Start: 59918

End: 60415

Strand: Direct

Name: 86360793

Synonym: RHE_PF00059

Alternate gene names: NA

Gene position: 59918-60415 (Clockwise)

Preceding gene: 86360787

Following gene: 86360794

Centisome position: 9.33

GC content: 58.03

Gene sequence:

>498_bases
ATGCGGCTCTTACTCAACCTTTGCCTTCTCTTCTTCGCCACGGGGCCGTCCTTGGCTGCCGAAGAGGCGGCCCGTCGAGC
GGCAAGCGATTTCGCCACCACCGCCACAATCTCGAACATGTTCGAGGTGGATGCCGCAAAAATCGAAATTGCTAAGGGGG
CGGCAGGTGACGCCAAACAGTTCGCCGACGACATGCTGAACGATCATGAGCGCGCGGGTGCGGTAATTGCCGATGCAGCC
AAGAAGGACGGCGTGCAGCTACCGACAGCCATTGACGACGAGCATAAAAAGAAGCTTGAAGCGCTTCAGCAGAGCGACCT
GGAAAATCTCGACCAGGCCTATCTCTCGACGCAAGTGACGGCGCATCAGGATGCAGTGGCGCTTTTTGATGACTATTCGC
AGAATGGGCCTGATGGGGCGCTGAAGCGCGCGTCGCAGAAGATCCTGCCGGACCTTAGAATGCATCTAACGCGAATCCGA
GGGCTGGCAGCGAAGTGA

Upstream 100 bases:

>100_bases
AAAAGGTTGACTGCAACTGTCTTCGATTATGGGAACCGTCCCCCGGTTCGGTTGTTGGGGCGCATTGCCTGCCTCAACCG
AGTGAACACGGAGAACGATG

Downstream 100 bases:

>100_bases
GGGACGTGTCTCCGGGAGCAGCATCGCACCCGCGGCTGGCGTCGCTCACTTCCCACGAGGTCGGCGGCGCCCGCAGGCTC
AATGCCCTGCTGCGGCTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MRLLLNLCLLFFATGPSLAAEEAARRAASDFATTATISNMFEVDAAKIEIAKGAAGDAKQFADDMLNDHERAGAVIADAA
KKDGVQLPTAIDDEHKKKLEALQQSDLENLDQAYLSTQVTAHQDAVALFDDYSQNGPDGALKRASQKILPDLRMHLTRIR
GLAAK

Sequences:

>Translated_165_residues
MRLLLNLCLLFFATGPSLAAEEAARRAASDFATTATISNMFEVDAAKIEIAKGAAGDAKQFADDMLNDHERAGAVIADAA
KKDGVQLPTAIDDEHKKKLEALQQSDLENLDQAYLSTQVTAHQDAVALFDDYSQNGPDGALKRASQKILPDLRMHLTRIR
GLAAK
>Mature_165_residues
MRLLLNLCLLFFATGPSLAAEEAARRAASDFATTATISNMFEVDAAKIEIAKGAAGDAKQFADDMLNDHERAGAVIADAA
KKDGVQLPTAIDDEHKKKLEALQQSDLENLDQAYLSTQVTAHQDAVALFDDYSQNGPDGALKRASQKILPDLRMHLTRIR
GLAAK

Specific function: Unknown

COG id: COG3652

COG function: function code S; Predicted outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17794; Mature: 17794

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLLNLCLLFFATGPSLAAEEAARRAASDFATTATISNMFEVDAAKIEIAKGAAGDAKQ
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHH
FADDMLNDHERAGAVIADAAKKDGVQLPTAIDDEHKKKLEALQQSDLENLDQAYLSTQVT
HHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHQDAVALFDDYSQNGPDGALKRASQKILPDLRMHLTRIRGLAAK
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRLLLNLCLLFFATGPSLAAEEAARRAASDFATTATISNMFEVDAAKIEIAKGAAGDAKQ
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHH
FADDMLNDHERAGAVIADAAKKDGVQLPTAIDDEHKKKLEALQQSDLENLDQAYLSTQVT
HHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHQDAVALFDDYSQNGPDGALKRASQKILPDLRMHLTRIRGLAAK
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA