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The map label for this gene is yesO [H]

Identifier: 86360781

GI number: 86360781

Start: 48897

End: 50186

Strand: Direct

Name: yesO [H]

Synonym: RHE_PF00047

Alternate gene names: 86360781

Gene position: 48897-50186 (Clockwise)

Preceding gene: 86360780

Following gene: 86360782

Centisome position: 7.61

GC content: 61.01

Gene sequence:

>1290_bases
ATGGGTAAACGTTTACTTTGGACTCTGGTCATGTCCTCGGCACTGTCAGCCATAGGGGCGCAGGCAGCGGAGAAGACCGC
AATACAGGTCATGCATCAGGGCGATCCCGGTTTCGTCGCCGCCTACGGAAAGGTCGCCGAGCGCTTCGAGGCCACAAATC
CCGGTGTCGACGTGCAGTTCATCTATGCGCCGCACGATGCCTATAACGAGAAGTTCAGCGCCGCCGTCATGTCCAAGCAG
CTGCCCGATGTGATGGAGCTCGATGCGCCGTTCCTCGCCAATTACGTCTGGTCGGGCTATCTTCAGCCGATCAAGCCGCT
GATCGACAAGGATGTCGTCGACGACATGACGGAGTCCAACATCGCCCAGGGCACATACCCGATCGACAAGGACCTCTACG
CAATCGGCCTGACCGACTCCTCGGTCGTTCTCTACGGCAACAAGCAATATCTCGAAGCGATCGGCGCCCGCATCCCGAAA
TCGGTCGACGACGCCTGGACGCGGGAGGAGTTCGAAACCTACCTGGAGAAGCTTTCCAAGCTCGACGGCGTGAAGTGGCC
GATCGACACCTTCCGCGGCTACGGCATCAAGACCGAATGGATCACCTATGCCTATGGCCCAATCCTGCAATCGGCCGGCT
GCGATCTCATCGACCGCAAGGCCTGGAAATCCGAGGGCACGCTTGATAGCGACGCCTGCGTCGATGCGCTTGCGATGATG
CAGAAATGGGTTAAGAACGGCTGGGTCGTGCCGCAGTCGGCCGGAACCAACCAGTTCTTCGTCGAAGGCAATCCGGCCGC
GCTGGCGCTCGGCGGACACTGGGTCTATGCCGAGGCTGCTGCGACCATGAAGGACAATATCGTCGTGCTGCCGCTTCCGA
AGTTCGGCGCCAAGGGTGCCAGCCCTGACGGCACCTGGATCTGGGCGGTCACCAAGACGTCGGCGCATCCCGAAATCGCA
GGCAAATTCATAAGTTTCCTGCTGAAGGACAAGGAATACAGGGCCTTCGTCGCAAGCCAGTCCGGCTATCCCGGTCTGAA
GAGCTTCGCCGCCGAATCTCCGCTCTATGCTCCCGGCGGCCCGATGGCGATCGCCTTCGAACAGGCATCGAAGACGGCCG
TCGCCCGCCCGCCGCACCCAGCCTACCCCACGATCACCGCCGCCTTCATGCAGGCGGTCGACGAGGTGTTCAATGGCGGC
GATCCGAAGGAGGCGCTGACAGCGGCCGCCGAGAAGATCGACCAGGATATCGAGGACAATGACGGCTATCCGCCGTTTGG
CGAAGAGTAA

Upstream 100 bases:

>100_bases
AGACCGCGCCCCGGTCGGGGTGCAGAAACTGCCGTTCCAGCTGGTGGAGCGGGCATCCGTATAATTGAAATAGGCCCATT
CAAATGGAGGAGGAATTCTA

Downstream 100 bases:

>100_bases
TAGACGTGATCGCCCTGCAAGTCCCCGCCTGATATTGCAGGGCGAACACCGGCATCCGGCTGGAGAGGAGGAGCCAATGA
CCATGCAACAAGCAACATCG

Product: sucrose ABC transporter, substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 428

Protein sequence:

>429_residues
MGKRLLWTLVMSSALSAIGAQAAEKTAIQVMHQGDPGFVAAYGKVAERFEATNPGVDVQFIYAPHDAYNEKFSAAVMSKQ
LPDVMELDAPFLANYVWSGYLQPIKPLIDKDVVDDMTESNIAQGTYPIDKDLYAIGLTDSSVVLYGNKQYLEAIGARIPK
SVDDAWTREEFETYLEKLSKLDGVKWPIDTFRGYGIKTEWITYAYGPILQSAGCDLIDRKAWKSEGTLDSDACVDALAMM
QKWVKNGWVVPQSAGTNQFFVEGNPAALALGGHWVYAEAAATMKDNIVVLPLPKFGAKGASPDGTWIWAVTKTSAHPEIA
GKFISFLLKDKEYRAFVASQSGYPGLKSFAAESPLYAPGGPMAIAFEQASKTAVARPPHPAYPTITAAFMQAVDEVFNGG
DPKEALTAAAEKIDQDIEDNDGYPPFGEE

Sequences:

>Translated_429_residues
MGKRLLWTLVMSSALSAIGAQAAEKTAIQVMHQGDPGFVAAYGKVAERFEATNPGVDVQFIYAPHDAYNEKFSAAVMSKQ
LPDVMELDAPFLANYVWSGYLQPIKPLIDKDVVDDMTESNIAQGTYPIDKDLYAIGLTDSSVVLYGNKQYLEAIGARIPK
SVDDAWTREEFETYLEKLSKLDGVKWPIDTFRGYGIKTEWITYAYGPILQSAGCDLIDRKAWKSEGTLDSDACVDALAMM
QKWVKNGWVVPQSAGTNQFFVEGNPAALALGGHWVYAEAAATMKDNIVVLPLPKFGAKGASPDGTWIWAVTKTSAHPEIA
GKFISFLLKDKEYRAFVASQSGYPGLKSFAAESPLYAPGGPMAIAFEQASKTAVARPPHPAYPTITAAFMQAVDEVFNGG
DPKEALTAAAEKIDQDIEDNDGYPPFGEE
>Mature_428_residues
GKRLLWTLVMSSALSAIGAQAAEKTAIQVMHQGDPGFVAAYGKVAERFEATNPGVDVQFIYAPHDAYNEKFSAAVMSKQL
PDVMELDAPFLANYVWSGYLQPIKPLIDKDVVDDMTESNIAQGTYPIDKDLYAIGLTDSSVVLYGNKQYLEAIGARIPKS
VDDAWTREEFETYLEKLSKLDGVKWPIDTFRGYGIKTEWITYAYGPILQSAGCDLIDRKAWKSEGTLDSDACVDALAMMQ
KWVKNGWVVPQSAGTNQFFVEGNPAALALGGHWVYAEAAATMKDNIVVLPLPKFGAKGASPDGTWIWAVTKTSAHPEIAG
KFISFLLKDKEYRAFVASQSGYPGLKSFAAESPLYAPGGPMAIAFEQASKTAVARPPHPAYPTITAAFMQAVDEVFNGGD
PKEALTAAAEKIDQDIEDNDGYPPFGEE

Specific function: May play role in the degradation of type I rhamnogalacturonan derived from plant cell walls [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 46671; Mature: 46540

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKRLLWTLVMSSALSAIGAQAAEKTAIQVMHQGDPGFVAAYGKVAERFEATNPGVDVQF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEHHHHHHHHHHCCCCCCEEEE
IYAPHDAYNEKFSAAVMSKQLPDVMELDAPFLANYVWSGYLQPIKPLIDKDVVDDMTESN
EECCCHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IAQGTYPIDKDLYAIGLTDSSVVLYGNKQYLEAIGARIPKSVDDAWTREEFETYLEKLSK
CCCCCCCCCCCEEEEEECCCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LDGVKWPIDTFRGYGIKTEWITYAYGPILQSAGCDLIDRKAWKSEGTLDSDACVDALAMM
HCCCCCCHHHHCCCCCEEHHEEHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHH
QKWVKNGWVVPQSAGTNQFFVEGNPAALALGGHWVYAEAAATMKDNIVVLPLPKFGAKGA
HHHHHCCEEEECCCCCCEEEEECCCEEEEECCEEEEEHHHHHHCCCEEEEECCCCCCCCC
SPDGTWIWAVTKTSAHPEIAGKFISFLLKDKEYRAFVASQSGYPGLKSFAAESPLYAPGG
CCCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHEEEEECCCCCCCHHHHHCCCCCCCCCC
PMAIAFEQASKTAVARPPHPAYPTITAAFMQAVDEVFNGGDPKEALTAAAEKIDQDIEDN
CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
DGYPPFGEE
CCCCCCCCC
>Mature Secondary Structure 
GKRLLWTLVMSSALSAIGAQAAEKTAIQVMHQGDPGFVAAYGKVAERFEATNPGVDVQF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEHHHHHHHHHHCCCCCCEEEE
IYAPHDAYNEKFSAAVMSKQLPDVMELDAPFLANYVWSGYLQPIKPLIDKDVVDDMTESN
EECCCHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IAQGTYPIDKDLYAIGLTDSSVVLYGNKQYLEAIGARIPKSVDDAWTREEFETYLEKLSK
CCCCCCCCCCCEEEEEECCCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LDGVKWPIDTFRGYGIKTEWITYAYGPILQSAGCDLIDRKAWKSEGTLDSDACVDALAMM
HCCCCCCHHHHCCCCCEEHHEEHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHH
QKWVKNGWVVPQSAGTNQFFVEGNPAALALGGHWVYAEAAATMKDNIVVLPLPKFGAKGA
HHHHHCCEEEECCCCCCEEEEECCCEEEEECCEEEEEHHHHHHCCCEEEEECCCCCCCCC
SPDGTWIWAVTKTSAHPEIAGKFISFLLKDKEYRAFVASQSGYPGLKSFAAESPLYAPGG
CCCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHEEEEECCCCCCCHHHHHCCCCCCCCCC
PMAIAFEQASKTAVARPPHPAYPTITAAFMQAVDEVFNGGDPKEALTAAAEKIDQDIEDN
CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
DGYPPFGEE
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]