| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86360758
Identifier: 86360758
GI number: 86360758
Start: 24619
End: 25230
Strand: Direct
Name: 86360758
Synonym: RHE_PF00024
Alternate gene names: NA
Gene position: 24619-25230 (Clockwise)
Preceding gene: 86360757
Following gene: 86360761
Centisome position: 3.83
GC content: 57.68
Gene sequence:
>612_bases ATGAAGCTATTCATTCTCCTGTTGGGCTTTCCCGGCGTCGGAAAGCTGACGATCGCGAGAGAACTGAGTCCGCTGCTGAC TGCAAAGGTTATTGACAATCATTGGTTCAACAACCCGATACTGCGTCTGCTTGACGACGACGGAACCACGCCTCTCCCGA AAGGAATATGGGAATATATTGGAAGAGTTCGCCAAGCCGTCCTGGATGCGATCGTCGCCTATGGCCCTCCTTCGGCAAAT TTCATTTCCACGCATGCCGGCATAGAAGGTGATGAGCGCAGCAATCGCACGTTCCAGCAGATTGCCGGCGCGGCCCGAGA ATGCGAGGCGCTGCTGGTGCCCGTGAGGTTGCTCTGCGACGAGGAGGAGTTGGCACGTCGCGTTGCCACACCGGCGCGTC GCGATCGGTTGAAGTCGATTGATGCGCAGGCATCGAGGGAGAAAAGCAGAAGAGCCCAGGTCCTCGCTCCCCAACACCCG TTTGCGCTGAATCTGGATGTCACCTCAAAGACGGCGGAAGCAAGCGCAGCAGCCATTCACGCCCATATCTTGAGGATGAC AACCGGCGAGCTCGGTTCGGTCCAGGGCAACGGTGTCGTTGCCCTGCCATAA
Upstream 100 bases:
>100_bases ATGATCTTGTGCACCGACCAAATCGGGCACGGCCTCTTAATCGTCGACTGCAGTGACTGCGAGGTTCGAGAAGTCAGCAG TGAATAGGGAAGACAGACCG
Downstream 100 bases:
>100_bases CCACCGGTCCTCAACATCCCTCACACCACCAACATCCCCTGCCGCTCAGCCAACGTCACCTCCGCCCGCGTCCCGGCATT GAACTCCAGAAAATCCGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MKLFILLLGFPGVGKLTIARELSPLLTAKVIDNHWFNNPILRLLDDDGTTPLPKGIWEYIGRVRQAVLDAIVAYGPPSAN FISTHAGIEGDERSNRTFQQIAGAARECEALLVPVRLLCDEEELARRVATPARRDRLKSIDAQASREKSRRAQVLAPQHP FALNLDVTSKTAEASAAAIHAHILRMTTGELGSVQGNGVVALP
Sequences:
>Translated_203_residues MKLFILLLGFPGVGKLTIARELSPLLTAKVIDNHWFNNPILRLLDDDGTTPLPKGIWEYIGRVRQAVLDAIVAYGPPSAN FISTHAGIEGDERSNRTFQQIAGAARECEALLVPVRLLCDEEELARRVATPARRDRLKSIDAQASREKSRRAQVLAPQHP FALNLDVTSKTAEASAAAIHAHILRMTTGELGSVQGNGVVALP >Mature_203_residues MKLFILLLGFPGVGKLTIARELSPLLTAKVIDNHWFNNPILRLLDDDGTTPLPKGIWEYIGRVRQAVLDAIVAYGPPSAN FISTHAGIEGDERSNRTFQQIAGAARECEALLVPVRLLCDEEELARRVATPARRDRLKSIDAQASREKSRRAQVLAPQHP FALNLDVTSKTAEASAAAIHAHILRMTTGELGSVQGNGVVALP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22087; Mature: 22087
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFILLLGFPGVGKLTIARELSPLLTAKVIDNHWFNNPILRLLDDDGTTPLPKGIWEYI CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHH GRVRQAVLDAIVAYGPPSANFISTHAGIEGDERSNRTFQQIAGAARECEALLVPVRLLCD HHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC EEELARRVATPARRDRLKSIDAQASREKSRRAQVLAPQHPFALNLDVTSKTAEASAAAIH HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCEECCCCCEEEEEECCCCCHHHHHHHHH AHILRMTTGELGSVQGNGVVALP HHHHHHHCCCCCCCCCCEEEECC >Mature Secondary Structure MKLFILLLGFPGVGKLTIARELSPLLTAKVIDNHWFNNPILRLLDDDGTTPLPKGIWEYI CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHH GRVRQAVLDAIVAYGPPSANFISTHAGIEGDERSNRTFQQIAGAARECEALLVPVRLLCD HHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC EEELARRVATPARRDRLKSIDAQASREKSRRAQVLAPQHPFALNLDVTSKTAEASAAAIH HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCEECCCCCEEEEEECCCCCHHHHHHHHH AHILRMTTGELGSVQGNGVVALP HHHHHHHCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA