| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86360757
Identifier: 86360757
GI number: 86360757
Start: 23286
End: 23726
Strand: Direct
Name: 86360757
Synonym: RHE_PF00023
Alternate gene names: NA
Gene position: 23286-23726 (Clockwise)
Preceding gene: 86360752
Following gene: 86360758
Centisome position: 3.62
GC content: 64.17
Gene sequence:
>441_bases ATGAACAGGCTTGCGCAATGCCATTGCGGATCACTCCGCGCAAAGACATCAGGCGATCCGCTCACGGTGAGCATCTGCCA CTGCCGCGATTGTCAGCGCAGAACCGGCGCCGTGGCCGGAAGCGGTGCGATCTTCGCGAAGGGCGAAGTGACGATCGAGG GAGATCGCAGAACCTTCGAGCGGGACGCCGCGCAAGGGCGCAAGGTGCGTTTCCACTTCTGCCCGAACTGCGGCACGTCC GTGTATTGGGAGGGCGACTTCAATCCCGACCTCTGCGGCGTCGCCGTCGGCGCCTTCGCCGACCCGGCATTTCCACCGCC ACTGGTGTCCGTCTACGAGGAGTCTAGGCATGATTGGCTTCAGCTTCCCGATGGGATGAAGCACGCGCAACGCGGGCTGG TTTCGGCAGCGGCTGCGGACAAGGAGCACGGCAACGGCTAG
Upstream 100 bases:
>100_bases GACTCTTGAGCGCCGGCGCGATTACCTCCTACACTTCTCATGGGACGCAGCGCTCTAACTGACAACGAACAAGGTCAGCA AAAAGCAACCGAGGTGACGG
Downstream 100 bases:
>100_bases CGGCCTTGGTGGCCGTGCGGCACGCGGGCGGCTCCTCCTCGGCAGCCCGTGCGGAGCGTGCGGCAACACCGCTGCTTGTC ATCTGACACCTGCGCACCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MNRLAQCHCGSLRAKTSGDPLTVSICHCRDCQRRTGAVAGSGAIFAKGEVTIEGDRRTFERDAAQGRKVRFHFCPNCGTS VYWEGDFNPDLCGVAVGAFADPAFPPPLVSVYEESRHDWLQLPDGMKHAQRGLVSAAAADKEHGNG
Sequences:
>Translated_146_residues MNRLAQCHCGSLRAKTSGDPLTVSICHCRDCQRRTGAVAGSGAIFAKGEVTIEGDRRTFERDAAQGRKVRFHFCPNCGTS VYWEGDFNPDLCGVAVGAFADPAFPPPLVSVYEESRHDWLQLPDGMKHAQRGLVSAAAADKEHGNG >Mature_146_residues MNRLAQCHCGSLRAKTSGDPLTVSICHCRDCQRRTGAVAGSGAIFAKGEVTIEGDRRTFERDAAQGRKVRFHFCPNCGTS VYWEGDFNPDLCGVAVGAFADPAFPPPLVSVYEESRHDWLQLPDGMKHAQRGLVSAAAADKEHGNG
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15762; Mature: 15762
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLAQCHCGSLRAKTSGDPLTVSICHCRDCQRRTGAVAGSGAIFAKGEVTIEGDRRTFE CCCCCCCCCCCEECCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEECCEEEEECCCHHHH RDAAQGRKVRFHFCPNCGTSVYWEGDFNPDLCGVAVGAFADPAFPPPLVSVYEESRHDWL HHHCCCCEEEEEECCCCCCEEEECCCCCCCHHHEECCCCCCCCCCCHHHHHHHHHCCCEE QLPDGMKHAQRGLVSAAAADKEHGNG ECCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNRLAQCHCGSLRAKTSGDPLTVSICHCRDCQRRTGAVAGSGAIFAKGEVTIEGDRRTFE CCCCCCCCCCCEECCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEECCEEEEECCCHHHH RDAAQGRKVRFHFCPNCGTSVYWEGDFNPDLCGVAVGAFADPAFPPPLVSVYEESRHDWL HHHCCCCEEEEEECCCCCCEEEECCCCCCCHHHEECCCCCCCCCCCHHHHHHHHHCCCEE QLPDGMKHAQRGLVSAAAADKEHGNG ECCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA