Click here to switch to the map view.

The map label for this gene is soj [H]

Identifier: 85861013

GI number: 85861013

Start: 3177743

End: 3178513

Strand: Direct

Name: soj [H]

Synonym: SYN_02053

Alternate gene names: 85861013

Gene position: 3177743-3178513 (Clockwise)

Preceding gene: 85861012

Following gene: NA

Centisome position: 99.95

GC content: 51.62

Gene sequence:

>771_bases
ATGCGTAAAGTGATCTCCATTGCCAATCAGAAAGGAGGGGTCGGGAAAACCACGACCGCCATCAACCTTTCTGCAACTCT
GGCATCCGCTGAAAAAAAGACCCTGCTCATCGACTGCGACGCCCAGGGAAATGCCAGCAGCGGTGTGGGTATTCAGCGGG
ACAAGTGTCAGGAAAAAAATCTCTACTATGCTCTGATTAACAGGGTCCCTCTGCGGGACGTGATTATGCCGACGTGCATC
CCTTATCTCGATGTCGTTGCCGCCACCCAGGATCTTGTCGGAATCGAGGTTGAATTCGCGTCGTTAGAGGAAAGAGAGAA
GCAGCTGAAAAAGCTGATACGGGAACTGGATCGGGAATATGAGTTCGTTATCCTGGATTGTCCGCCTTCCCTCGGTTTTT
TGACACTCAACGCGCTGGTGGCTTCGTCCTCCGTCATCGTTCCGCTGCAGTGCGAGTATTTTGCCATGGAGGGGCTGGGA
CATTTGATGAGCACGCTCAAACTCGTCAAAACCCGCCTTAATCCCTTTCTGTCCCTGGGAGGAATTCTACTGACCATGTT
CGATTCCAGAAATCTCCTTTCCCGCCGGGTCAGCGAGGATGTAAGGAGTCATTTCGGCAATCATGTTTTTAATACGGTTA
TTCCGCGAAATGTTCGCCTCTCGGAAAGCCCCAGCCACGGGCTGCCGATTATTTTTTACGATATCAAATCCCGCGGGGCG
GTTTCCTACATGGAACTTGCCCAGGAAGTCCTGAACTGCAAGAGGATCTAA

Upstream 100 bases:

>100_bases
ATCATTAATAAAAATACTCCTTCTCAAAAAGTTGATTTTGTGTTAGTTTCTGCCACTCCCTGCAGAAGAGAAAGATACTG
GAAGACCGGTTTTTATTCCC

Downstream 100 bases:

>100_bases
ATGCCGCCCAAGAACATTCTAGGCAAGGGATTGGGGGCGATTCTTCCCGATCTCCTTGACGACATAAACGAAATTCCCTC
CTTTCTGCGCTGTGGAGTGG

Product: chromosome partitioning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MRKVISIANQKGGVGKTTTAINLSATLASAEKKTLLIDCDAQGNASSGVGIQRDKCQEKNLYYALINRVPLRDVIMPTCI
PYLDVVAATQDLVGIEVEFASLEEREKQLKKLIRELDREYEFVILDCPPSLGFLTLNALVASSSVIVPLQCEYFAMEGLG
HLMSTLKLVKTRLNPFLSLGGILLTMFDSRNLLSRRVSEDVRSHFGNHVFNTVIPRNVRLSESPSHGLPIIFYDIKSRGA
VSYMELAQEVLNCKRI

Sequences:

>Translated_256_residues
MRKVISIANQKGGVGKTTTAINLSATLASAEKKTLLIDCDAQGNASSGVGIQRDKCQEKNLYYALINRVPLRDVIMPTCI
PYLDVVAATQDLVGIEVEFASLEEREKQLKKLIRELDREYEFVILDCPPSLGFLTLNALVASSSVIVPLQCEYFAMEGLG
HLMSTLKLVKTRLNPFLSLGGILLTMFDSRNLLSRRVSEDVRSHFGNHVFNTVIPRNVRLSESPSHGLPIIFYDIKSRGA
VSYMELAQEVLNCKRI
>Mature_256_residues
MRKVISIANQKGGVGKTTTAINLSATLASAEKKTLLIDCDAQGNASSGVGIQRDKCQEKNLYYALINRVPLRDVIMPTCI
PYLDVVAATQDLVGIEVEFASLEEREKQLKKLIRELDREYEFVILDCPPSLGFLTLNALVASSSVIVPLQCEYFAMEGLG
HLMSTLKLVKTRLNPFLSLGGILLTMFDSRNLLSRRVSEDVRSHFGNHVFNTVIPRNVRLSESPSHGLPIIFYDIKSRGA
VSYMELAQEVLNCKRI

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 28432; Mature: 28432

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKVISIANQKGGVGKTTTAINLSATLASAEKKTLLIDCDAQGNASSGVGIQRDKCQEKN
CCCHHHHHCCCCCCCCCEEEEEEHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC
LYYALINRVPLRDVIMPTCIPYLDVVAATQDLVGIEVEFASLEEREKQLKKLIRELDREY
HHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHCCCC
EFVILDCPPSLGFLTLNALVASSSVIVPLQCEYFAMEGLGHLMSTLKLVKTRLNPFLSLG
EEEEEECCCCCCHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GILLTMFDSRNLLSRRVSEDVRSHFGNHVFNTVIPRNVRLSESPSHGLPIIFYDIKSRGA
HHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHCCCCEEECCCCCCCCCEEEEECCCCCC
VSYMELAQEVLNCKRI
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRKVISIANQKGGVGKTTTAINLSATLASAEKKTLLIDCDAQGNASSGVGIQRDKCQEKN
CCCHHHHHCCCCCCCCCEEEEEEHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC
LYYALINRVPLRDVIMPTCIPYLDVVAATQDLVGIEVEFASLEEREKQLKKLIRELDREY
HHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHCCCC
EFVILDCPPSLGFLTLNALVASSSVIVPLQCEYFAMEGLGHLMSTLKLVKTRLNPFLSLG
EEEEEECCCCCCHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GILLTMFDSRNLLSRRVSEDVRSHFGNHVFNTVIPRNVRLSESPSHGLPIIFYDIKSRGA
HHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHCCCCEEECCCCCCCCCEEEEECCCCCC
VSYMELAQEVLNCKRI
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]