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The map label for this gene is 85860998

Identifier: 85860998

GI number: 85860998

Start: 3162240

End: 3162890

Strand: Direct

Name: 85860998

Synonym: SYN_02067

Alternate gene names: NA

Gene position: 3162240-3162890 (Clockwise)

Preceding gene: 85860997

Following gene: 85860999

Centisome position: 99.46

GC content: 60.98

Gene sequence:

>651_bases
GTGGCAAGGCCATCATCAAAGGACAGTGACATGAAAAACCTGCTTTGCATCTCCCGACTGTTTCTTCCAGCCGTTGCGAT
TCTGCTTGCCGGTTGCGCCAGCGTGCAGCCGGCCCGGTTTTACACGCTGACGCCGCTTGAACAGCAGGCGGCAAAGCCAA
ACCCGCGTGATGAGGCGCCACCTCCTCCTTCGGTCCTCATCGCTCCGGTTGAAATCCCCGATTACCTCGATCGTCCCCAG
ATTGTGACCCGGGATGGGAGAAACGAATTGAACCTTGCCGAATTCGACCGCTGGGCGGGTTCCCTCCGGGAAAACATCGC
CGCCGTGATGGCCGAAAACCTTTCAATTCTCCTCAGCTCAGACCGGATATTCGTTTATCCCCAGGTGCGTGGTGAAAAAA
CGGATTACCTGATGGCCCTGCGCATTCTCCGGCTGGATTGCATACCCGGCGACTCGGTGCTCCTCAAGGCGCAGTGGACG
ATCTTTGCCGGCCAGGACCGGGGAGGCGTCACTCACATGGCCGCGTTCACCGAACGGCTGGCCGACGGCAGTTACGAAGC
GCTGGCCGCGGCCGTCAGCAGCACCCTGGCACAGGCAAGCCGGGAAATCGCCCGGACGTTATGGACACCCCCGACAGCAG
CCCCCCGCTGA

Upstream 100 bases:

>100_bases
GTCGTGGAAATGAACAAAACTCTGCGGGAACTTGGCGCGACGTCGCGCTCGCTGCGCCACCTTTCCGATTATCTGGAGCG
CCATCCGGAGTCCCTGCTCC

Downstream 100 bases:

>100_bases
ACTCATGAACAGCAAAGGCCTGCAAAACGGAAAAGATGAATCGGCAATTGATCCTTAATTCTGATCGTGGCCCTGACCGA
CTACGCGAACACGGCGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Resolvase RNAse H-Like Fold

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MARPSSKDSDMKNLLCISRLFLPAVAILLAGCASVQPARFYTLTPLEQQAAKPNPRDEAPPPPSVLIAPVEIPDYLDRPQ
IVTRDGRNELNLAEFDRWAGSLRENIAAVMAENLSILLSSDRIFVYPQVRGEKTDYLMALRILRLDCIPGDSVLLKAQWT
IFAGQDRGGVTHMAAFTERLADGSYEALAAAVSSTLAQASREIARTLWTPPTAAPR

Sequences:

>Translated_216_residues
MARPSSKDSDMKNLLCISRLFLPAVAILLAGCASVQPARFYTLTPLEQQAAKPNPRDEAPPPPSVLIAPVEIPDYLDRPQ
IVTRDGRNELNLAEFDRWAGSLRENIAAVMAENLSILLSSDRIFVYPQVRGEKTDYLMALRILRLDCIPGDSVLLKAQWT
IFAGQDRGGVTHMAAFTERLADGSYEALAAAVSSTLAQASREIARTLWTPPTAAPR
>Mature_215_residues
ARPSSKDSDMKNLLCISRLFLPAVAILLAGCASVQPARFYTLTPLEQQAAKPNPRDEAPPPPSVLIAPVEIPDYLDRPQI
VTRDGRNELNLAEFDRWAGSLRENIAAVMAENLSILLSSDRIFVYPQVRGEKTDYLMALRILRLDCIPGDSVLLKAQWTI
FAGQDRGGVTHMAAFTERLADGSYEALAAAVSSTLAQASREIARTLWTPPTAAPR

Specific function: Unknown

COG id: COG3009

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23659; Mature: 23528

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPSSKDSDMKNLLCISRLFLPAVAILLAGCASVQPARFYTLTPLEQQAAKPNPRDEAP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHCCCCCCCCCC
PPPSVLIAPVEIPDYLDRPQIVTRDGRNELNLAEFDRWAGSLRENIAAVMAENLSILLSS
CCCCEEEEECCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEC
DRIFVYPQVRGEKTDYLMALRILRLDCIPGDSVLLKAQWTIFAGQDRGGVTHMAAFTERL
CEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHH
ADGSYEALAAAVSSTLAQASREIARTLWTPPTAAPR
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
ARPSSKDSDMKNLLCISRLFLPAVAILLAGCASVQPARFYTLTPLEQQAAKPNPRDEAP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHCCCCCCCCCC
PPPSVLIAPVEIPDYLDRPQIVTRDGRNELNLAEFDRWAGSLRENIAAVMAENLSILLSS
CCCCEEEEECCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEC
DRIFVYPQVRGEKTDYLMALRILRLDCIPGDSVLLKAQWTIFAGQDRGGVTHMAAFTERL
CEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHH
ADGSYEALAAAVSSTLAQASREIARTLWTPPTAAPR
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA