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The map label for this gene is yrbE [C]

Identifier: 85860995

GI number: 85860995

Start: 3159311

End: 3160456

Strand: Direct

Name: yrbE [C]

Synonym: SYN_02070

Alternate gene names: 85860995

Gene position: 3159311-3160456 (Clockwise)

Preceding gene: 85860994

Following gene: 85860996

Centisome position: 99.37

GC content: 59.16

Gene sequence:

>1146_bases
ATGAGTTCATCAACTTATAAGGAAGCCACTTTTTCCTTCATCTCACCATCAACGGACGCGCTGGTACTGAGATTGTCCGG
AGACTGGATGGCGAACGGCCGGCTTCCTGATGCCGAAGAGATCCGGCAGGCCCTTTCACAACAGATTCCGGCGCCTCGGA
TTATCTTCGACGTGGTCGGACTCGGCGCCTGGGACAGCGGTCTGCTGATCTTTCTGGCGAAGGTCTTCGACATCTGCCGC
GGAAACGGGATTTCCGTCGATTCTTCCGGTCTGCCTCCAGGCGTTTGCAGACTGCTGGAGCTGGCCTCACCGGAAAAACA
ACGTTCGGGAGTAACGCGCGAAAAATCTCCCCCTTCGTTTCTTGTGAGGGTTGCCGATGCCACTCTGGATTTCGGCAGGG
GCTTCAAGGATATGCTCGCCTTTGTCGGCGATGCCACCCTTTCCGTCCTTCGAATGCTGCGGGGAAAACCCGGCTTCCGG
CGGTCCGATCTGATCCTGATTCTTCAGGAAACCGGCGCCCAGGCACTGCCCATCGTTTCCCTCATCAGTCTCCTTGTGGG
AATGATCCTCGCCTTCGTGGCGGCCATTCAGCTCAGGATGTTCGGCGTTCAGATCTACGTCGCCGACGTGGTGGGAATCG
CCATGGTGCGGGTCATGGGGGCGATCATGACGGGCATCATCATGGCCGGCCGCACGGGTGCGGCTTTTGCCGCCCAGCTC
GGCATGATGCAGGTCAACGAAGAGATTGACGCGCTGGAAGTCCTGGGCGTTTCTCCCGTGGACTTCCTCGTCCTGCCCCG
TCTGCTGGCGCTGATGCTGATGATGCCCCTGCTGTGCATCTATTCCGACCTCATGGGGGTTGTGGGGGGGTTGATTGTCG
GCGTCGGCATGCTTGATCTCGGAGTCATCGAGTACTATCATGAAACCGTGAATGCGGTGAGCCTGACCTATTTCTGGATC
GGCCTCTTCCACAGTTTTGTCTTCGGAGTGCTCGTGGCCCTGGCCGGCTGTCTGCGCGGCCTGCAGTGTGAACGGAACGC
ATCCGCCGTCGGCTTTGCCGCCACATCGGCGGTGGTCACCGGCATCGTCAGCATCGTCGTGGCGACCGCCATCATTACTC
TGCTCTGCCAGGTGCTTGGGATATGA

Upstream 100 bases:

>100_bases
GGCCGACAGTCTGCTGGATGGCAGCGATATCAGCGGCCGGATGTCGGCGGACGAGCTGTTTCAGCTGATCCGGGAAGGGT
AATTTTTCTGAGGAACAAAG

Downstream 100 bases:

>100_bases
ACGCGTCGGAAAAACTTCCCGAAAGCGAGCGGGAAACGGTCATCGAAGTCCACGATCTCGAGATATCCTACGGCACTTTC
GTGCTCATGCGCGATCTGAA

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MSSSTYKEATFSFISPSTDALVLRLSGDWMANGRLPDAEEIRQALSQQIPAPRIIFDVVGLGAWDSGLLIFLAKVFDICR
GNGISVDSSGLPPGVCRLLELASPEKQRSGVTREKSPPSFLVRVADATLDFGRGFKDMLAFVGDATLSVLRMLRGKPGFR
RSDLILILQETGAQALPIVSLISLLVGMILAFVAAIQLRMFGVQIYVADVVGIAMVRVMGAIMTGIIMAGRTGAAFAAQL
GMMQVNEEIDALEVLGVSPVDFLVLPRLLALMLMMPLLCIYSDLMGVVGGLIVGVGMLDLGVIEYYHETVNAVSLTYFWI
GLFHSFVFGVLVALAGCLRGLQCERNASAVGFAATSAVVTGIVSIVVATAIITLLCQVLGI

Sequences:

>Translated_381_residues
MSSSTYKEATFSFISPSTDALVLRLSGDWMANGRLPDAEEIRQALSQQIPAPRIIFDVVGLGAWDSGLLIFLAKVFDICR
GNGISVDSSGLPPGVCRLLELASPEKQRSGVTREKSPPSFLVRVADATLDFGRGFKDMLAFVGDATLSVLRMLRGKPGFR
RSDLILILQETGAQALPIVSLISLLVGMILAFVAAIQLRMFGVQIYVADVVGIAMVRVMGAIMTGIIMAGRTGAAFAAQL
GMMQVNEEIDALEVLGVSPVDFLVLPRLLALMLMMPLLCIYSDLMGVVGGLIVGVGMLDLGVIEYYHETVNAVSLTYFWI
GLFHSFVFGVLVALAGCLRGLQCERNASAVGFAATSAVVTGIVSIVVATAIITLLCQVLGI
>Mature_380_residues
SSSTYKEATFSFISPSTDALVLRLSGDWMANGRLPDAEEIRQALSQQIPAPRIIFDVVGLGAWDSGLLIFLAKVFDICRG
NGISVDSSGLPPGVCRLLELASPEKQRSGVTREKSPPSFLVRVADATLDFGRGFKDMLAFVGDATLSVLRMLRGKPGFRR
SDLILILQETGAQALPIVSLISLLVGMILAFVAAIQLRMFGVQIYVADVVGIAMVRVMGAIMTGIIMAGRTGAAFAAQLG
MMQVNEEIDALEVLGVSPVDFLVLPRLLALMLMMPLLCIYSDLMGVVGGLIVGVGMLDLGVIEYYHETVNAVSLTYFWIG
LFHSFVFGVLVALAGCLRGLQCERNASAVGFAATSAVVTGIVSIVVATAIITLLCQVLGI

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=230, Percent_Identity=26.0869565217391, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 40538; Mature: 40407

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSTYKEATFSFISPSTDALVLRLSGDWMANGRLPDAEEIRQALSQQIPAPRIIFDVVG
CCCCCHHHHHHHHCCCCCCEEEEEECCCEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHH
LGAWDSGLLIFLAKVFDICRGNGISVDSSGLPPGVCRLLELASPEKQRSGVTREKSPPSF
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCCHHH
LVRVADATLDFGRGFKDMLAFVGDATLSVLRMLRGKPGFRRSDLILILQETGAQALPIVS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHH
LISLLVGMILAFVAAIQLRMFGVQIYVADVVGIAMVRVMGAIMTGIIMAGRTGAAFAAQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
GMMQVNEEIDALEVLGVSPVDFLVLPRLLALMLMMPLLCIYSDLMGVVGGLIVGVGMLDL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVIEYYHETVNAVSLTYFWIGLFHSFVFGVLVALAGCLRGLQCERNASAVGFAATSAVVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
GIVSIVVATAIITLLCQVLGI
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSSTYKEATFSFISPSTDALVLRLSGDWMANGRLPDAEEIRQALSQQIPAPRIIFDVVG
CCCCHHHHHHHHCCCCCCEEEEEECCCEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHH
LGAWDSGLLIFLAKVFDICRGNGISVDSSGLPPGVCRLLELASPEKQRSGVTREKSPPSF
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCCHHH
LVRVADATLDFGRGFKDMLAFVGDATLSVLRMLRGKPGFRRSDLILILQETGAQALPIVS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHH
LISLLVGMILAFVAAIQLRMFGVQIYVADVVGIAMVRVMGAIMTGIIMAGRTGAAFAAQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
GMMQVNEEIDALEVLGVSPVDFLVLPRLLALMLMMPLLCIYSDLMGVVGGLIVGVGMLDL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVIEYYHETVNAVSLTYFWIGLFHSFVFGVLVALAGCLRGLQCERNASAVGFAATSAVVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
GIVSIVVATAIITLLCQVLGI
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA