| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860914
Identifier: 85860914
GI number: 85860914
Start: 3086599
End: 3086751
Strand: Direct
Name: 85860914
Synonym: SYN_01608
Alternate gene names: NA
Gene position: 3086599-3086751 (Clockwise)
Preceding gene: 85860910
Following gene: 85860916
Centisome position: 97.08
GC content: 44.44
Gene sequence:
>153_bases ATGGGCGAAGAGGATGAGGATTCGATTCATAGGGCCTATTCCATGTTGATGCTGCTCTGTTTTGAAAGGTTGATTTTTAT TAAATATACCATCGCATCCGGATGCACAAGAGCAACATGCCGGGATTTAGCAGAAGAACCATGGCGAAGCTGA
Upstream 100 bases:
>100_bases AGTCAGGATAGAGCTCATATAGATCATTGAGCGTCACCGCCGGATTGTCCCGGATAGCCGCCAGCAGGGCTCTGTTTACC CGCGGTTTTTCAAACCGCGG
Downstream 100 bases:
>100_bases AGCAGAATTCCGCCATCCCGCTCAAGCTTCCGTCAAGTCGCCCCCTGTCGATCTGACCTTGACACGCCATGGCCTTTCCC GTACACTCCCGCCATCAAAA
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 50; Mature: 49
Protein sequence:
>50_residues MGEEDEDSIHRAYSMLMLLCFERLIFIKYTIASGCTRATCRDLAEEPWRS
Sequences:
>Translated_50_residues MGEEDEDSIHRAYSMLMLLCFERLIFIKYTIASGCTRATCRDLAEEPWRS >Mature_49_residues GEEDEDSIHRAYSMLMLLCFERLIFIKYTIASGCTRATCRDLAEEPWRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5860; Mature: 5729
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 12.0 %Cys+Met (Translated Protein) 6.1 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 10.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEEDEDSIHRAYSMLMLLCFERLIFIKYTIASGCTRATCRDLAEEPWRS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC >Mature Secondary Structure GEEDEDSIHRAYSMLMLLCFERLIFIKYTIASGCTRATCRDLAEEPWRS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA