| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860908
Identifier: 85860908
GI number: 85860908
Start: 3079640
End: 3080569
Strand: Direct
Name: 85860908
Synonym: SYN_01616
Alternate gene names: NA
Gene position: 3079640-3080569 (Clockwise)
Preceding gene: 85860905
Following gene: 85860910
Centisome position: 96.87
GC content: 47.2
Gene sequence:
>930_bases ATGAGAAAAATACTTTTATCATTATTTATAGCCACATTGCTGGCACTTTCTACCCAAGGTTGCTTCCTCGGTGTTGAACC TGGTTCCTACGAATATACCGGGGACACCGGCCAGGAACCGCCACCCATCTTATTTGAGGCGCCGCCGGACGTGATCGTCA TGCCTGACACCCGGGATGTTTACGTAGTCCCTGATATCTATATCGACTTGTATTTCTGGAATGGATGGTGGTGGCGTTCA TGGGAAGGTCGATGGTATCGATCATTCTATTATGACCGGGGCTGGATTTATTATAGAAGCATACCCGGGTTCTATTTCGA CGTGAACCCAGGCTGGAGGATTTATTATAAAAACCGCAACTGGCAGGGACATCGGTGGCTCTATGAAAAGATATCTAATC AGCGGCTTCAGCAGAACTGGAAGAGCTGGCAGAACAATCGTTACTGGGAAAGAGAAAAAACCTGGGGCGTCGAAAACTAT CAGCCTCAGATAGAACAGCAGAGGCAGAAAATACGGCTACAGCTACAGCAGGACACCCAAAAACAGCAAAACAGGCAGGA GCAAAACAGGCAGAACAGACCACAAACTCAACGGCAGATACAGCTACAGCAGGACACCCAAAAACAGCAAAACAGGCAGG AGCAAAACAGGCAGAACAGACCACAAACTCAACGGCAGATACAGCTACAGCAGGACACCCAAAAACAGCAAAACAGGCAG GAGCAAAACAGGCAGAACAGACCACAAACTCAACGGCAGATACAGCTACAGCAGGACACCCAAAAACAGCAAAACAGGCA GGAGCAAAACAGGCAGAACAGACCACAAACTCAACGGCAGATACAGCTACAGCAGGACACCCAAAAACAGCAAAACAGGC AGGAGCAAAACAAAATATTTCTAACAATCCCAAGAAATACAGAAATATGA
Upstream 100 bases:
>100_bases ATCATGAAGGTGATGAATCTGCCTGCCCTTGCAGATGCGGATCAGGTATTAACAAAAAAGATGTTCCACGTGAAACACGT TAGATAAAAAGAGGATCGTC
Downstream 100 bases:
>100_bases TTAACAGAACAGAGTCAACACCCTGAACCGGAACAATACGGAATCATAAATCAGCGACGTAATTTACCAGTTGCCTGCGC TGACCTGAAATGTAACGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MRKILLSLFIATLLALSTQGCFLGVEPGSYEYTGDTGQEPPPILFEAPPDVIVMPDTRDVYVVPDIYIDLYFWNGWWWRS WEGRWYRSFYYDRGWIYYRSIPGFYFDVNPGWRIYYKNRNWQGHRWLYEKISNQRLQQNWKSWQNNRYWEREKTWGVENY QPQIEQQRQKIRLQLQQDTQKQQNRQEQNRQNRPQTQRQIQLQQDTQKQQNRQEQNRQNRPQTQRQIQLQQDTQKQQNRQ EQNRQNRPQTQRQIQLQQDTQKQQNRQEQNRQNRPQTQRQIQLQQDTQKQQNRQEQNKIFLTIPRNTEI
Sequences:
>Translated_309_residues MRKILLSLFIATLLALSTQGCFLGVEPGSYEYTGDTGQEPPPILFEAPPDVIVMPDTRDVYVVPDIYIDLYFWNGWWWRS WEGRWYRSFYYDRGWIYYRSIPGFYFDVNPGWRIYYKNRNWQGHRWLYEKISNQRLQQNWKSWQNNRYWEREKTWGVENY QPQIEQQRQKIRLQLQQDTQKQQNRQEQNRQNRPQTQRQIQLQQDTQKQQNRQEQNRQNRPQTQRQIQLQQDTQKQQNRQ EQNRQNRPQTQRQIQLQQDTQKQQNRQEQNRQNRPQTQRQIQLQQDTQKQQNRQEQNKIFLTIPRNTEI >Mature_309_residues MRKILLSLFIATLLALSTQGCFLGVEPGSYEYTGDTGQEPPPILFEAPPDVIVMPDTRDVYVVPDIYIDLYFWNGWWWRS WEGRWYRSFYYDRGWIYYRSIPGFYFDVNPGWRIYYKNRNWQGHRWLYEKISNQRLQQNWKSWQNNRYWEREKTWGVENY QPQIEQQRQKIRLQLQQDTQKQQNRQEQNRQNRPQTQRQIQLQQDTQKQQNRQEQNRQNRPQTQRQIQLQQDTQKQQNRQ EQNRQNRPQTQRQIQLQQDTQKQQNRQEQNRQNRPQTQRQIQLQQDTQKQQNRQEQNKIFLTIPRNTEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38469; Mature: 38469
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKILLSLFIATLLALSTQGCFLGVEPGSYEYTGDTGQEPPPILFEAPPDVIVMPDTRDV CHHHHHHHHHHHHHHHCCCCCEEECCCCCEEECCCCCCCCCCEEEECCCCEEEECCCCCE YVVPDIYIDLYFWNGWWWRSWEGRWYRSFYYDRGWIYYRSIPGFYFDVNPGWRIYYKNRN EECCEEEEEEEEECCEEEECCCCCEEEEEEECCCEEEEEECCCEEEECCCCEEEEEECCC WQGHRWLYEKISNQRLQQNWKSWQNNRYWEREKTWGVENYQPQIEQQRQKIRLQLQQDTQ CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH KQQNRQEQNRQNRPQTQRQIQLQQDTQKQQNRQEQNRQNRPQTQRQIQLQQDTQKQQNRQ HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH EQNRQNRPQTQRQIQLQQDTQKQQNRQEQNRQNRPQTQRQIQLQQDTQKQQNRQEQNKIF HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEE LTIPRNTEI EEECCCCCC >Mature Secondary Structure MRKILLSLFIATLLALSTQGCFLGVEPGSYEYTGDTGQEPPPILFEAPPDVIVMPDTRDV CHHHHHHHHHHHHHHHCCCCCEEECCCCCEEECCCCCCCCCCEEEECCCCEEEECCCCCE YVVPDIYIDLYFWNGWWWRSWEGRWYRSFYYDRGWIYYRSIPGFYFDVNPGWRIYYKNRN EECCEEEEEEEEECCEEEECCCCCEEEEEEECCCEEEEEECCCEEEECCCCEEEEEECCC WQGHRWLYEKISNQRLQQNWKSWQNNRYWEREKTWGVENYQPQIEQQRQKIRLQLQQDTQ CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH KQQNRQEQNRQNRPQTQRQIQLQQDTQKQQNRQEQNRQNRPQTQRQIQLQQDTQKQQNRQ HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH EQNRQNRPQTQRQIQLQQDTQKQQNRQEQNRQNRPQTQRQIQLQQDTQKQQNRQEQNKIF HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEE LTIPRNTEI EEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA