| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860857
Identifier: 85860857
GI number: 85860857
Start: 3019997
End: 3020494
Strand: Direct
Name: 85860857
Synonym: SYN_01671
Alternate gene names: NA
Gene position: 3019997-3020494 (Clockwise)
Preceding gene: 85860856
Following gene: 85860858
Centisome position: 94.99
GC content: 60.84
Gene sequence:
>498_bases ATGGCCCAATATGACGCCGTGGTGACGAGTCTTCTTCCGAACGGCAGGGCCGAGATTGTTATCCGGCCGGACAAGCCCGG CATACCCGATGCGCCGGAAATATCCAGGCGGGTGTGCCACTGTGCGACCGACGGTTCAATGGTTCGGACCGAAGCGTTGA ACCGGGCCGATGCCCAGGTCGGCGACTGGGTTTCCGTCTACCGCAAGCCCGGCGTCGTCATGAAGAACATCGCCGCCCTG ATCGGCTTTCCTCTGGCTGGTGTAATCGCCGGCACGATGCTGGGGAGCGCGCTGGGCAAAGCTGCGATGGCAATCGCTGC CCTTGGTGGGGGTCTGCTCGGCATTGTACTGGGGGTTCGATATTACCGGCATCTGTCCGAAGAGAATCTGATGGTCATCG ACCGGGTGATCAGATCCCGGGAGGAATTAGCCGCCTTTTCCGGCGGTCGTGCCGGTTGCCGGGACGACTGCAGTCAATGT ATTCCGTGGTCATCTTAA
Upstream 100 bases:
>100_bases GTAAGAAGTTGCTTTTTTTCATTGACATACCTCCGCGGTTTCCTTATCCTCTTCTGCCCTGAAAAGAATTTATGAAGAAG TTTATGAATAGAGGTGCACA
Downstream 100 bases:
>100_bases CGCCATCCTTTGCCTTTGAATCCTCTCTGAGACCGGGTTTGGATACACTGATATGCCGCATTTAAAAAGTGCGGGACCGG CAGCGGTTCGGACTGTATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MAQYDAVVTSLLPNGRAEIVIRPDKPGIPDAPEISRRVCHCATDGSMVRTEALNRADAQVGDWVSVYRKPGVVMKNIAAL IGFPLAGVIAGTMLGSALGKAAMAIAALGGGLLGIVLGVRYYRHLSEENLMVIDRVIRSREELAAFSGGRAGCRDDCSQC IPWSS
Sequences:
>Translated_165_residues MAQYDAVVTSLLPNGRAEIVIRPDKPGIPDAPEISRRVCHCATDGSMVRTEALNRADAQVGDWVSVYRKPGVVMKNIAAL IGFPLAGVIAGTMLGSALGKAAMAIAALGGGLLGIVLGVRYYRHLSEENLMVIDRVIRSREELAAFSGGRAGCRDDCSQC IPWSS >Mature_164_residues AQYDAVVTSLLPNGRAEIVIRPDKPGIPDAPEISRRVCHCATDGSMVRTEALNRADAQVGDWVSVYRKPGVVMKNIAALI GFPLAGVIAGTMLGSALGKAAMAIAALGGGLLGIVLGVRYYRHLSEENLMVIDRVIRSREELAAFSGGRAGCRDDCSQCI PWSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17483; Mature: 17351
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQYDAVVTSLLPNGRAEIVIRPDKPGIPDAPEISRRVCHCATDGSMVRTEALNRADAQV CCHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH GDWVSVYRKPGVVMKNIAALIGFPLAGVIAGTMLGSALGKAAMAIAALGGGLLGIVLGVR HHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH YYRHLSEENLMVIDRVIRSREELAAFSGGRAGCRDDCSQCIPWSS HHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCC >Mature Secondary Structure AQYDAVVTSLLPNGRAEIVIRPDKPGIPDAPEISRRVCHCATDGSMVRTEALNRADAQV CHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH GDWVSVYRKPGVVMKNIAALIGFPLAGVIAGTMLGSALGKAAMAIAALGGGLLGIVLGVR HHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH YYRHLSEENLMVIDRVIRSREELAAFSGGRAGCRDDCSQCIPWSS HHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA