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The map label for this gene is fdhD [H]

Identifier: 85860852

GI number: 85860852

Start: 3014422

End: 3015243

Strand: Direct

Name: fdhD [H]

Synonym: SYN_01676

Alternate gene names: 85860852

Gene position: 3014422-3015243 (Clockwise)

Preceding gene: 85860851

Following gene: 85860854

Centisome position: 94.81

GC content: 54.38

Gene sequence:

>822_bases
ATGATGGAACCGGCATCAAAAATCGTTCCAGTCCTCAAGCTGTCGGACGGTCGGTTTACGCCTTCTGAAGCCAGCATTGT
TGTCGAAAAAGAATTGCCCGTCATCATCAACGGAGAACATCTGGCGATCGCATCCCTCACGCCATCAATGGAGAGGGAAT
TTGTAGCAGGCTATCTCTTCGGGCAGGGATTTATCGAAAGCGCCGGAGAGATCACCAGGCTGGATATCACAGACCAGGGC
GCCGACGTTGTCCTGGCAACGGCGGATATCCTGTCAAGCCGCAGAATGAAGACCACCTATCGCATCGTCTCAGGAGGCGG
TCGCACCGCCTACTTTGAAACCTCCGCCCTGCCACGCCTTACGTCCAACTTCAGCATCGCGAAAGAAGATATTTTTCGGG
CCATGAACCTCCTCTTCGAACGCGCTTCTCTTTACCGCGAAACCGGAGGTGTGCATTCCGCCGCACTTTTCGATGGGGCT
ATGAATCTCCTCTGCGTCGTGGAAGATATCGGACGGCATAACACCCTGGATAAAGTGATCGGCTATGCGCTCCTGAATGG
AATCGACTGTGCCGATAAACTCCTTGTCTCCACCGGCCGCATGGCCTCTGAAATGGTTATGAAAATCGGCCGGGCCGGCA
TTCCCCTGGTCGCCACCAAGACCGCCGTCACAGATAAAGGCATTGAAATCGGTGAACAATGCGGGCTGACCCTCATCGGT
TTCGTACGGGACGTCGGTTTCAGGATGCACACGAACATGGAGGTCCGGGTTTTTCAGAAAGCTGAAATGAGGATTTACAC
CGGGGTGGAGAGAGTGCGCTGA

Upstream 100 bases:

>100_bases
CCTCAAAGGCAGTGGAACTGGCGGAAAAATCAGGAATAACCATCGTCGGAATGGTCAGGGGAGATTTCATGATCGTGTAC
TCTCATCCGGAGAGAATACA

Downstream 100 bases:

>100_bases
ATATCGGCGCTTCTCAAGTTGAATGAGAGAAACCCGGAAAGACATTACCCCGATCATGTGGGCTTTCGGAAAACAGCCTG
GATATCGCCGAGAGCCCGCT

Product: formate dehydrogenase activity protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MMEPASKIVPVLKLSDGRFTPSEASIVVEKELPVIINGEHLAIASLTPSMEREFVAGYLFGQGFIESAGEITRLDITDQG
ADVVLATADILSSRRMKTTYRIVSGGGRTAYFETSALPRLTSNFSIAKEDIFRAMNLLFERASLYRETGGVHSAALFDGA
MNLLCVVEDIGRHNTLDKVIGYALLNGIDCADKLLVSTGRMASEMVMKIGRAGIPLVATKTAVTDKGIEIGEQCGLTLIG
FVRDVGFRMHTNMEVRVFQKAEMRIYTGVERVR

Sequences:

>Translated_273_residues
MMEPASKIVPVLKLSDGRFTPSEASIVVEKELPVIINGEHLAIASLTPSMEREFVAGYLFGQGFIESAGEITRLDITDQG
ADVVLATADILSSRRMKTTYRIVSGGGRTAYFETSALPRLTSNFSIAKEDIFRAMNLLFERASLYRETGGVHSAALFDGA
MNLLCVVEDIGRHNTLDKVIGYALLNGIDCADKLLVSTGRMASEMVMKIGRAGIPLVATKTAVTDKGIEIGEQCGLTLIG
FVRDVGFRMHTNMEVRVFQKAEMRIYTGVERVR
>Mature_273_residues
MMEPASKIVPVLKLSDGRFTPSEASIVVEKELPVIINGEHLAIASLTPSMEREFVAGYLFGQGFIESAGEITRLDITDQG
ADVVLATADILSSRRMKTTYRIVSGGGRTAYFETSALPRLTSNFSIAKEDIFRAMNLLFERASLYRETGGVHSAALFDGA
MNLLCVVEDIGRHNTLDKVIGYALLNGIDCADKLLVSTGRMASEMVMKIGRAGIPLVATKTAVTDKGIEIGEQCGLTLIG
FVRDVGFRMHTNMEVRVFQKAEMRIYTGVERVR

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=234, Percent_Identity=29.0598290598291, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 29818; Mature: 29818

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMEPASKIVPVLKLSDGRFTPSEASIVVEKELPVIINGEHLAIASLTPSMEREFVAGYLF
CCCCHHHCCEEEEECCCCCCCCCCEEEEECCCCEEECCCEEEEEECCCHHHHHHHHHHHH
GQGFIESAGEITRLDITDQGADVVLATADILSSRRMKTTYRIVSGGGRTAYFETSALPRL
CCHHHHCCCCEEEEEECCCCCCEEEEEHHHHHCCCCEEEEEEEECCCCEEEEECCCCCHH
TSNFSIAKEDIFRAMNLLFERASLYRETGGVHSAALFDGAMNLLCVVEDIGRHNTLDKVI
HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
GYALLNGIDCADKLLVSTGRMASEMVMKIGRAGIPLVATKTAVTDKGIEIGEQCGLTLIG
HHHHHCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEHHHCCCCCHHHHHCCCHHHH
FVRDVGFRMHTNMEVRVFQKAEMRIYTGVERVR
HHHHCCEEEECCCEEEEEEHHHHHHHHHHHHCC
>Mature Secondary Structure
MMEPASKIVPVLKLSDGRFTPSEASIVVEKELPVIINGEHLAIASLTPSMEREFVAGYLF
CCCCHHHCCEEEEECCCCCCCCCCEEEEECCCCEEECCCEEEEEECCCHHHHHHHHHHHH
GQGFIESAGEITRLDITDQGADVVLATADILSSRRMKTTYRIVSGGGRTAYFETSALPRL
CCHHHHCCCCEEEEEECCCCCCEEEEEHHHHHCCCCEEEEEEEECCCCEEEEECCCCCHH
TSNFSIAKEDIFRAMNLLFERASLYRETGGVHSAALFDGAMNLLCVVEDIGRHNTLDKVI
HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
GYALLNGIDCADKLLVSTGRMASEMVMKIGRAGIPLVATKTAVTDKGIEIGEQCGLTLIG
HHHHHCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEHHHCCCCCHHHHHCCCHHHH
FVRDVGFRMHTNMEVRVFQKAEMRIYTGVERVR
HHHHCCEEEECCCEEEEEEHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA