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The map label for this gene is fdhD [H]

Identifier: 85860851

GI number: 85860851

Start: 3013724

End: 3014425

Strand: Direct

Name: fdhD [H]

Synonym: SYN_01677

Alternate gene names: 85860851

Gene position: 3013724-3014425 (Clockwise)

Preceding gene: 85860850

Following gene: 85860852

Centisome position: 94.79

GC content: 50.71

Gene sequence:

>702_bases
ATGCAAAGCGGATTTCTCAAGGAAGTGCAATTTACCCGGGCTGATGGAGAGTTAACACCCACAGGCGAAAGAGTCGTGAG
AGAGAAGGCGCTTTCCATGTTTGTGGATGGCAGGCACTGCGCCACTGCCATGATACTGGCCACGCTGGAAAAAGAATATA
TTACCGGATATCTGTATGTGCAGGGATTGATTCATGAGGCAACGGACATTGCCTCCCTTGAAATAACAAATGACATTGCC
CGGGTCAGTCTCAAGACCGGTATTGAAAAACGTTCTTTTCCCCGGAACATCACCTCAAATCTTAAAATCTCCAAAGAAGA
TATTTTCCGGAGTGTCCGCGCCATCCTGAAGTCTCCGGTTTTCGAAGAAACCGAAGCCGTGCATTCCGCTGGCCTTTTTA
TCGCCGGCAGTAAAGCCATCTCCCTTGCTGAAGACCTGGGCCGCCACAACGCCATGGACAAGGTCATCGGTGCCGCATTA
CTCCAAAAGGTCGATTTTTCCAGGACGCTCGCCACTTCCACCGGTCGGCAGCCGGCTGAGATGATTTTCAAGTACCTCAG
CGCAGGCATCCCGATCATCGCCACCAAGGGAGTACCTACCTCAAAGGCAGTGGAACTGGCGGAAAAATCAGGAATAACCA
TCGTCGGAATGGTCAGGGGAGATTTCATGATCGTGTACTCTCATCCGGAGAGAATACAATGA

Upstream 100 bases:

>100_bases
CGCTCTGAATTCGTCAATCTGGGAAAACAGCTTGATAATGTGAAGACGGAATAAAAAAGAAGCATTTCAGCGGTCTCGCC
ATGACGGAGCACGGTGTTCT

Downstream 100 bases:

>100_bases
TGGAACCGGCATCAAAAATCGTTCCAGTCCTCAAGCTGTCGGACGGTCGGTTTACGCCTTCTGAAGCCAGCATTGTTGTC
GAAAAAGAATTGCCCGTCAT

Product: formate dehydrogenase activity protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MQSGFLKEVQFTRADGELTPTGERVVREKALSMFVDGRHCATAMILATLEKEYITGYLYVQGLIHEATDIASLEITNDIA
RVSLKTGIEKRSFPRNITSNLKISKEDIFRSVRAILKSPVFEETEAVHSAGLFIAGSKAISLAEDLGRHNAMDKVIGAAL
LQKVDFSRTLATSTGRQPAEMIFKYLSAGIPIIATKGVPTSKAVELAEKSGITIVGMVRGDFMIVYSHPERIQ

Sequences:

>Translated_233_residues
MQSGFLKEVQFTRADGELTPTGERVVREKALSMFVDGRHCATAMILATLEKEYITGYLYVQGLIHEATDIASLEITNDIA
RVSLKTGIEKRSFPRNITSNLKISKEDIFRSVRAILKSPVFEETEAVHSAGLFIAGSKAISLAEDLGRHNAMDKVIGAAL
LQKVDFSRTLATSTGRQPAEMIFKYLSAGIPIIATKGVPTSKAVELAEKSGITIVGMVRGDFMIVYSHPERIQ
>Mature_233_residues
MQSGFLKEVQFTRADGELTPTGERVVREKALSMFVDGRHCATAMILATLEKEYITGYLYVQGLIHEATDIASLEITNDIA
RVSLKTGIEKRSFPRNITSNLKISKEDIFRSVRAILKSPVFEETEAVHSAGLFIAGSKAISLAEDLGRHNAMDKVIGAAL
LQKVDFSRTLATSTGRQPAEMIFKYLSAGIPIIATKGVPTSKAVELAEKSGITIVGMVRGDFMIVYSHPERIQ

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=262, Percent_Identity=21.3740458015267, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 25504; Mature: 25504

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSGFLKEVQFTRADGELTPTGERVVREKALSMFVDGRHCATAMILATLEKEYITGYLYV
CCCCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
QGLIHEATDIASLEITNDIARVSLKTGIEKRSFPRNITSNLKISKEDIFRSVRAILKSPV
HHHHHHHHHHHEEEEHHHHHHHHHHHCCCHHCCCCCCCCCCEECHHHHHHHHHHHHHCCC
FEETEAVHSAGLFIAGSKAISLAEDLGRHNAMDKVIGAALLQKVDFSRTLATSTGRQPAE
HHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
MIFKYLSAGIPIIATKGVPTSKAVELAEKSGITIVGMVRGDFMIVYSHPERIQ
HHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCEEEEECCCCCCC
>Mature Secondary Structure
MQSGFLKEVQFTRADGELTPTGERVVREKALSMFVDGRHCATAMILATLEKEYITGYLYV
CCCCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
QGLIHEATDIASLEITNDIARVSLKTGIEKRSFPRNITSNLKISKEDIFRSVRAILKSPV
HHHHHHHHHHHEEEEHHHHHHHHHHHCCCHHCCCCCCCCCCEECHHHHHHHHHHHHHCCC
FEETEAVHSAGLFIAGSKAISLAEDLGRHNAMDKVIGAALLQKVDFSRTLATSTGRQPAE
HHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
MIFKYLSAGIPIIATKGVPTSKAVELAEKSGITIVGMVRGDFMIVYSHPERIQ
HHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]