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The map label for this gene is yrbE [C]

Identifier: 85860837

GI number: 85860837

Start: 3003132

End: 3003941

Strand: Direct

Name: yrbE [C]

Synonym: SYN_01690

Alternate gene names: 85860837

Gene position: 3003132-3003941 (Clockwise)

Preceding gene: 85860836

Following gene: 85860838

Centisome position: 94.46

GC content: 47.65

Gene sequence:

>810_bases
ATGATCCCTTTCGGCAGAAAATCCATGGTCACTTTCATTGAAGGAATCGGCACAAAGGCATTAGTGGTTGCCCGTTCCGT
AATCAACACCCTCTTTTTCGCCTGGCGGGCGATCGTTCATCTGGCGGATCGCAAGACATACAACAATGCCACTAAAATGG
TCATTGTAACCCAGTTGTATTTTACGGCGGTTCAGATATTGCCTCTGTTTATATCCATCTCCGTCATTCTGGGCCTGTTT
CTGATGGGAATCGTGTTCGAGTCCATCAAGAACCTCGGTATGACCGGGTATCTGGGAAATATTCTGATGGGATTCATTGT
GACGGAACTTTGCCCCTTCATGACGGTGCTCATGCTTGCGCTGCGCTCAGGCGCGGCGATCAACACGGAAATCGCGGTCA
TGAAAGTCAACAAAGAATTCGACGCATTGAGCGTCTTCAACATCGACATCTTTGATTATATCTATGTGCCGAGAATTTTG
AACGGGGTCGTCTCCGTTGTCCTTCTCAATGGTGTTTTTACGCTCGTGCTGCTGACCAGCGGCGCTATTTTTTCGAGGGT
GATCTTCGGCATCGGAATGGATGCTTACATCAGCATCCTGATCACCTCCGCTGAATTTCCGGATCTGGTGATCCTGCTCC
TGAAATGCGCGACATTCGGTTTTTTCATCACCCTGCTTCCGATCCGTTACGGATTGACGGCATCGAATGAATTGACCAGC
ATCCCCATAGCGGTCTTGAATGGAATGATCAACGTCTTTATCGCAATCGTCATCATCGAGGTTATATCATTAATTCTAAG
CTCCATTTAA

Upstream 100 bases:

>100_bases
TACCGTCCTGTGATACGTATCAGGCTCATTCAAACTAAAGGTTTTTCACCGAAGTCCTCAATATTTAAAACGATTCCCCG
GATGACACAATGCGGAGAAA

Downstream 100 bases:

>100_bases
TCTTATTCGAAGATGAAAATCGCCTTACCGAGGCCCTGCTGGATTTGAAAGAAAGACATCAGCAGAACCTGGGACTCGTT
TCTCTTGACATTCCTCTGAT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MIPFGRKSMVTFIEGIGTKALVVARSVINTLFFAWRAIVHLADRKTYNNATKMVIVTQLYFTAVQILPLFISISVILGLF
LMGIVFESIKNLGMTGYLGNILMGFIVTELCPFMTVLMLALRSGAAINTEIAVMKVNKEFDALSVFNIDIFDYIYVPRIL
NGVVSVVLLNGVFTLVLLTSGAIFSRVIFGIGMDAYISILITSAEFPDLVILLLKCATFGFFITLLPIRYGLTASNELTS
IPIAVLNGMINVFIAIVIIEVISLILSSI

Sequences:

>Translated_269_residues
MIPFGRKSMVTFIEGIGTKALVVARSVINTLFFAWRAIVHLADRKTYNNATKMVIVTQLYFTAVQILPLFISISVILGLF
LMGIVFESIKNLGMTGYLGNILMGFIVTELCPFMTVLMLALRSGAAINTEIAVMKVNKEFDALSVFNIDIFDYIYVPRIL
NGVVSVVLLNGVFTLVLLTSGAIFSRVIFGIGMDAYISILITSAEFPDLVILLLKCATFGFFITLLPIRYGLTASNELTS
IPIAVLNGMINVFIAIVIIEVISLILSSI
>Mature_269_residues
MIPFGRKSMVTFIEGIGTKALVVARSVINTLFFAWRAIVHLADRKTYNNATKMVIVTQLYFTAVQILPLFISISVILGLF
LMGIVFESIKNLGMTGYLGNILMGFIVTELCPFMTVLMLALRSGAAINTEIAVMKVNKEFDALSVFNIDIFDYIYVPRIL
NGVVSVVLLNGVFTLVLLTSGAIFSRVIFGIGMDAYISILITSAEFPDLVILLLKCATFGFFITLLPIRYGLTASNELTS
IPIAVLNGMINVFIAIVIIEVISLILSSI

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 29469; Mature: 29469

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPFGRKSMVTFIEGIGTKALVVARSVINTLFFAWRAIVHLADRKTYNNATKMVIVTQLY
CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
FTAVQILPLFISISVILGLFLMGIVFESIKNLGMTGYLGNILMGFIVTELCPFMTVLMLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LRSGAAINTEIAVMKVNKEFDALSVFNIDIFDYIYVPRILNGVVSVVLLNGVFTLVLLTS
HHCCCCCCCEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GAIFSRVIFGIGMDAYISILITSAEFPDLVILLLKCATFGFFITLLPIRYGLTASNELTS
CHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
IPIAVLNGMINVFIAIVIIEVISLILSSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIPFGRKSMVTFIEGIGTKALVVARSVINTLFFAWRAIVHLADRKTYNNATKMVIVTQLY
CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
FTAVQILPLFISISVILGLFLMGIVFESIKNLGMTGYLGNILMGFIVTELCPFMTVLMLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LRSGAAINTEIAVMKVNKEFDALSVFNIDIFDYIYVPRILNGVVSVVLLNGVFTLVLLTS
HHCCCCCCCEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GAIFSRVIFGIGMDAYISILITSAEFPDLVILLLKCATFGFFITLLPIRYGLTASNELTS
CHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
IPIAVLNGMINVFIAIVIIEVISLILSSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]