The gene/protein map for NC_005823 is currently unavailable.
Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

Click here to switch to the map view.

The map label for this gene is 85860787

Identifier: 85860787

GI number: 85860787

Start: 2955614

End: 2956192

Strand: Direct

Name: 85860787

Synonym: SYN_00333

Alternate gene names: NA

Gene position: 2955614-2956192 (Clockwise)

Preceding gene: 85860785

Following gene: 85860788

Centisome position: 92.96

GC content: 49.05

Gene sequence:

>579_bases
ATGAAATTTAATTCCATTGCCACAAAAGCCTTGCTTTTCATTGTGCTGTCGTTGTTTGTTTTTCTCAGAAGCAACGCGCC
GGGACAGGAACAAATCTTCCCGGCTTACGGAGTCGGGAAGATTGAGGTGCGTCTTTACACGGACTATTTCTGCCCGCCCT
GCCGGAATATGGAACCGGCGGTGGAGCCGATCCTGAAAGATCTGATCAAAAATAACGTTATCCGGCTGACTCTGGTGGAT
GTTCCCTTAAGCCGCCAGAGCATTCTGTACACCCGGTATTTTCTCTATGCCCTGAAGAGTAAAAATGATCCGGAACATGC
CATCAAGATCAGGAAGATACTGTTCGAGACCGCCGAAGCCGGCAGCGTCACAACACAGGAGCAGATTGAAAAGCATTTGA
AAAGCAAGGAGATACCATTTCATCCCTTTGACCTGAAATCCGCCTTCGACCGCTTCAACGTCCTGATCCGGGAAGATCAC
ATCAATGCAACACCGACCTGCGTCATCATAAAAAGCGGTAAGAAGGAAGTTTTCAGCGGAGGGGAAGACATCGTCAACGC
CCTCAGACACTTGCGATGA

Upstream 100 bases:

>100_bases
TGCACCCCGTGAATCTCCTTGGAAAAAGGATAGAGCAACCCCTTTAATCGATCGGAAATAATTTCCAGAAATCATATGGA
AAATCAAAGGGTTAAATTAC

Downstream 100 bases:

>100_bases
ATGAGAAAGGAAATAAAAAAACGGCTCATAACCAAGGAATAAGGCAATGACATGGGATAAAGTTTTAAAAGCCATCAATA
TTATTTTTCCTTTGATCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MKFNSIATKALLFIVLSLFVFLRSNAPGQEQIFPAYGVGKIEVRLYTDYFCPPCRNMEPAVEPILKDLIKNNVIRLTLVD
VPLSRQSILYTRYFLYALKSKNDPEHAIKIRKILFETAEAGSVTTQEQIEKHLKSKEIPFHPFDLKSAFDRFNVLIREDH
INATPTCVIIKSGKKEVFSGGEDIVNALRHLR

Sequences:

>Translated_192_residues
MKFNSIATKALLFIVLSLFVFLRSNAPGQEQIFPAYGVGKIEVRLYTDYFCPPCRNMEPAVEPILKDLIKNNVIRLTLVD
VPLSRQSILYTRYFLYALKSKNDPEHAIKIRKILFETAEAGSVTTQEQIEKHLKSKEIPFHPFDLKSAFDRFNVLIREDH
INATPTCVIIKSGKKEVFSGGEDIVNALRHLR
>Mature_192_residues
MKFNSIATKALLFIVLSLFVFLRSNAPGQEQIFPAYGVGKIEVRLYTDYFCPPCRNMEPAVEPILKDLIKNNVIRLTLVD
VPLSRQSILYTRYFLYALKSKNDPEHAIKIRKILFETAEAGSVTTQEQIEKHLKSKEIPFHPFDLKSAFDRFNVLIREDH
INATPTCVIIKSGKKEVFSGGEDIVNALRHLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21981; Mature: 21981

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFNSIATKALLFIVLSLFVFLRSNAPGQEQIFPAYGVGKIEVRLYTDYFCPPCRNMEPA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHH
VEPILKDLIKNNVIRLTLVDVPLSRQSILYTRYFLYALKSKNDPEHAIKIRKILFETAEA
HHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
GSVTTQEQIEKHLKSKEIPFHPFDLKSAFDRFNVLIREDHINATPTCVIIKSGKKEVFSG
CCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEEEECCCCCCCEEEEEECCCHHHHCC
GEDIVNALRHLR
CHHHHHHHHHCC
>Mature Secondary Structure
MKFNSIATKALLFIVLSLFVFLRSNAPGQEQIFPAYGVGKIEVRLYTDYFCPPCRNMEPA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHH
VEPILKDLIKNNVIRLTLVDVPLSRQSILYTRYFLYALKSKNDPEHAIKIRKILFETAEA
HHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
GSVTTQEQIEKHLKSKEIPFHPFDLKSAFDRFNVLIREDHINATPTCVIIKSGKKEVFSG
CCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEEEECCCCCCCEEEEEECCCHHHHCC
GEDIVNALRHLR
CHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA