| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
Click here to switch to the map view.
The map label for this gene is arsB [H]
Identifier: 85860780
GI number: 85860780
Start: 2951524
End: 2952687
Strand: Direct
Name: arsB [H]
Synonym: SYN_00340
Alternate gene names: 85860780
Gene position: 2951524-2952687 (Clockwise)
Preceding gene: 85860779
Following gene: 85860781
Centisome position: 92.84
GC content: 51.89
Gene sequence:
>1164_bases ATGAAGATGATTTTTGCTTCAATGTGGTGCGAGACGGTCATATGCTCAGGCAGAAGGAGGAGCGGAAAAAAAATGGCACA AGCTGAAGAAAAACGACTTTCTTTTTTGGACCGGTTTTTAACCCTGTGGATTTTTCTGGCCATGTTCGTCGGCGTGATGG GGGGATACCTCTATCCCGGAATCCGGGACGTCATCAACATCTTCCAGGTCGGCACAACCAATATCCCCATCGCCATCGGT CTGATCCTGATGATGTATCCCCCCCTGGCCAAGGTCAAGTATGAAAAGCTGGGCCAGGTTTTCACTAACGGCAAGGTACT GGCCCTTTCGCTTGTTCAGAACTGGATTATTGGTCCGATTCTGATGTTCCTGCTGGCGATCACCTTTCTTTCCGGCTATC ATGAATACATGGTGGGCCTCATCCTTATCGGCCTCGCCCGCTGCATCGCCATGGTCATCGTCTGGAACGATCTGGCCGAA GGCGACCGGGAATACTGCGCCGGCCTCGTCGCCTTCAACTCGATCTTTCAGGTCCTCTTCTTTTCCGTTTACGCTTATAT CTTCATTACGATTCTTCCAACGTGGGTCGGGCTTAAAGGGGCCGTCGTCGACATCTCCATCGGGCAGATCGCCGAGAGCG TATTCATTTATCTGGGCATTCCCTTCATCGCGGGGATCATTTCCCGTTTCGTCGGGCTGAAGACGAAGGGGATCCTCTGG TATGAAGAGAAATTCATCCCGAGGATCAGTCCCATCACCCTGATCGCCCTGCTTTTTACCATCCTCGTCATGTTCTCCCT GAAAGGGGAATATATCGTTGAACTGCCCATGGATGTCGTCCGCGTGGCCGTCCCTCTTTTCATTTACTTTGTGGTCATGT TCTTCGTGTCTTTCTTTCTGTCCATGAAAGTCCGGGCTACGTACGAAGAGTCCACGACCCTGAGTTTTACCGCCGCCTCC AATAATTTCGAACTCGCCATCGCCGTGGCCATCGCCGTCTTCGGAATCAATTCCGGAGAGGCCTTTGCCTGCGTCATTGG CCCTTTGCTGGAGGTACCGGTCCTTATCTCTCTGGTGAACGTGGCCCTCTGGTTCAAGAAGAAATACTTCCCTCATACCA AGGCGACTCCTACCGGGGTTTGCCATGTAACTTGTGAGAATTAG
Upstream 100 bases:
>100_bases CAGACGGGAGGAAATCTCATGCCACAAGGAAGAGGTCTGCGAAGAATCAGGATACTGAACACATTTCCAAGCGGAAATAT GATTTGACGCAGATTTCAGC
Downstream 100 bases:
>100_bases TAATATATGAAAGGAGAAAGGGATTGAAAGAGCGTTATAAACTTTTAATTATTGCGCTGACCTTTCTGGGGGCCTACTTC ATCCCCTGGACTCATCCCGT
Product: arsenic resistance protein acr3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MKMIFASMWCETVICSGRRRSGKKMAQAEEKRLSFLDRFLTLWIFLAMFVGVMGGYLYPGIRDVINIFQVGTTNIPIAIG LILMMYPPLAKVKYEKLGQVFTNGKVLALSLVQNWIIGPILMFLLAITFLSGYHEYMVGLILIGLARCIAMVIVWNDLAE GDREYCAGLVAFNSIFQVLFFSVYAYIFITILPTWVGLKGAVVDISIGQIAESVFIYLGIPFIAGIISRFVGLKTKGILW YEEKFIPRISPITLIALLFTILVMFSLKGEYIVELPMDVVRVAVPLFIYFVVMFFVSFFLSMKVRATYEESTTLSFTAAS NNFELAIAVAIAVFGINSGEAFACVIGPLLEVPVLISLVNVALWFKKKYFPHTKATPTGVCHVTCEN
Sequences:
>Translated_387_residues MKMIFASMWCETVICSGRRRSGKKMAQAEEKRLSFLDRFLTLWIFLAMFVGVMGGYLYPGIRDVINIFQVGTTNIPIAIG LILMMYPPLAKVKYEKLGQVFTNGKVLALSLVQNWIIGPILMFLLAITFLSGYHEYMVGLILIGLARCIAMVIVWNDLAE GDREYCAGLVAFNSIFQVLFFSVYAYIFITILPTWVGLKGAVVDISIGQIAESVFIYLGIPFIAGIISRFVGLKTKGILW YEEKFIPRISPITLIALLFTILVMFSLKGEYIVELPMDVVRVAVPLFIYFVVMFFVSFFLSMKVRATYEESTTLSFTAAS NNFELAIAVAIAVFGINSGEAFACVIGPLLEVPVLISLVNVALWFKKKYFPHTKATPTGVCHVTCEN >Mature_387_residues MKMIFASMWCETVICSGRRRSGKKMAQAEEKRLSFLDRFLTLWIFLAMFVGVMGGYLYPGIRDVINIFQVGTTNIPIAIG LILMMYPPLAKVKYEKLGQVFTNGKVLALSLVQNWIIGPILMFLLAITFLSGYHEYMVGLILIGLARCIAMVIVWNDLAE GDREYCAGLVAFNSIFQVLFFSVYAYIFITILPTWVGLKGAVVDISIGQIAESVFIYLGIPFIAGIISRFVGLKTKGILW YEEKFIPRISPITLIALLFTILVMFSLKGEYIVELPMDVVRVAVPLFIYFVVMFFVSFFLSMKVRATYEESTTLSFTAAS NNFELAIAVAIAVFGINSGEAFACVIGPLLEVPVLISLVNVALWFKKKYFPHTKATPTGVCHVTCEN
Specific function: Seems to confer resistance to arsenite by allowing cells to extrude this compound. Could be part of an arsenite extrusion pump [H]
COG id: COG0798
COG function: function code P; Arsenite efflux pump ACR3 and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ACR3 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6325459, Length=336, Percent_Identity=36.3095238095238, Blast_Score=171, Evalue=1e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004706 - InterPro: IPR002657 [H]
Pfam domain/function: PF01758 SBF [H]
EC number: NA
Molecular weight: Translated: 43248; Mature: 43248
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMIFASMWCETVICSGRRRSGKKMAQAEEKRLSFLDRFLTLWIFLAMFVGVMGGYLYPG CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC IRDVINIFQVGTTNIPIAIGLILMMYPPLAKVKYEKLGQVFTNGKVLALSLVQNWIIGPI HHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LMFLLAITFLSGYHEYMVGLILIGLARCIAMVIVWNDLAEGDREYCAGLVAFNSIFQVLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FSVYAYIFITILPTWVGLKGAVVDISIGQIAESVFIYLGIPFIAGIISRFVGLKTKGILW HHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE YEEKFIPRISPITLIALLFTILVMFSLKGEYIVELPMDVVRVAVPLFIYFVVMFFVSFFL EHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH SMKVRATYEESTTLSFTAASNNFELAIAVAIAVFGINSGEAFACVIGPLLEVPVLISLVN HHHHHEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH VALWFKKKYFPHTKATPTGVCHVTCEN HHHHHHHHCCCCCCCCCCCEEEEEECC >Mature Secondary Structure MKMIFASMWCETVICSGRRRSGKKMAQAEEKRLSFLDRFLTLWIFLAMFVGVMGGYLYPG CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC IRDVINIFQVGTTNIPIAIGLILMMYPPLAKVKYEKLGQVFTNGKVLALSLVQNWIIGPI HHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LMFLLAITFLSGYHEYMVGLILIGLARCIAMVIVWNDLAEGDREYCAGLVAFNSIFQVLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FSVYAYIFITILPTWVGLKGAVVDISIGQIAESVFIYLGIPFIAGIISRFVGLKTKGILW HHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE YEEKFIPRISPITLIALLFTILVMFSLKGEYIVELPMDVVRVAVPLFIYFVVMFFVSFFL EHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH SMKVRATYEESTTLSFTAASNNFELAIAVAIAVFGINSGEAFACVIGPLLEVPVLISLVN HHHHHEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH VALWFKKKYFPHTKATPTGVCHVTCEN HHHHHHHHCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7704261; 8969508; 9384377; 7489895; 9537360 [H]