Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85860744

Identifier: 85860744

GI number: 85860744

Start: 2922912

End: 2923658

Strand: Direct

Name: 85860744

Synonym: SYN_00376

Alternate gene names: NA

Gene position: 2922912-2923658 (Clockwise)

Preceding gene: 85860742

Following gene: 85860745

Centisome position: 91.94

GC content: 55.15

Gene sequence:

>747_bases
ATGATGATGAAAGCGATATCCATGATCCTGCCATACTCAGTGATTATTCCTGTTTTCCGTGAATCGTCCTGCATAAAAGA
TACGATCAGACATGTCCTTGATGTGGCGGCAGGTGCTGTCATCGAGATTATCGTGGTAGACGGGGATCTTTCTGGAGGAA
CGATCCGGGAAATTCGCGACATCCGGAACGGCAGGGTGCGGAAGGTCCTGTCGGAAAAGGGGCGCGGGATGCAGCTCAAC
CGGGGGGCATCCCTGGCGCAGGGGGAAATTTTACTCTTTCTTCATGCCGACACCCGCCTTCCTGAAGGGGCCTTCGATAA
AATCGCCGTTTCCATGAAAGACCAGCGGATTGTGGGAGGCGCCTTCCGGCTGGCTATCGACTCCCCGCGTCTTCCCTTCC
GGCTCATCGAAAAATTTGTCGCCTGTCGATCCCGTATCCTGGGAATTCCTTACGGCGATCAGGGGATCTTTGTTCGGAAG
GCCGCTTTTCAGACCCTCGAAGGATTCCGGAACGTCCCTATCATGGAGGACCTGGATCTCATGCGCCGCATTCGAAGGTG
CAAAGGCCGCATCGTCATCCTTGATGATCCTGTCGTCACCTCCGCCCGCCGCTGGGAACAGGAAGGGATCCTTTACTGTA
CCCTGCGAAACTGGTGTCTTGTCCTGTTCTTTCTGCTAGGCGTTCCTCCGGAAAAACTTCTCAAATTTTATCCCTCCTCA
CGCACTGCGCCTCCCCGCGCCCGGTAA

Upstream 100 bases:

>100_bases
TGGCGTACTGCCGTTTCATAATACTGACCCTTTCCAAGCGGACAAACCCCGCACCCTTGCGTATTCGTAGCAAATCTTTT
ATAAAGGGCTCAACATCATC

Downstream 100 bases:

>100_bases
AGGTAGCTCCTTTCGCCTCTTCTATACTCATACCGTGAAGATTTTAGCGGCATCTCTTCCAGTCATTCCCTGCGGATTCA
TGCCATACGGTTATTTTAGA

Product: cell wall biogenesis glycosyltransferase

Products: NA

Alternate protein names: Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase; Glycosyltransferase; Cell Wall Biosynthesis Glycosyltransferase; Family 2 Glycosyl Transferase; Glycosyltransferase Involved In Cell Wall Biogenesis; Glycosyl Transferase Family 2 Protein; Group Glycosyltransferase; Cell Wall Biogenesis Glycosyltransferase; Glycosyl Transferase-Related Protein; Glycosyltransferase Group 2 Family Protein; Glycosyl Transferase Group 2 Family; Glycosyltransferases Involved In Cell Wall Biogenesis

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MMMKAISMILPYSVIIPVFRESSCIKDTIRHVLDVAAGAVIEIIVVDGDLSGGTIREIRDIRNGRVRKVLSEKGRGMQLN
RGASLAQGEILLFLHADTRLPEGAFDKIAVSMKDQRIVGGAFRLAIDSPRLPFRLIEKFVACRSRILGIPYGDQGIFVRK
AAFQTLEGFRNVPIMEDLDLMRRIRRCKGRIVILDDPVVTSARRWEQEGILYCTLRNWCLVLFFLLGVPPEKLLKFYPSS
RTAPPRAR

Sequences:

>Translated_248_residues
MMMKAISMILPYSVIIPVFRESSCIKDTIRHVLDVAAGAVIEIIVVDGDLSGGTIREIRDIRNGRVRKVLSEKGRGMQLN
RGASLAQGEILLFLHADTRLPEGAFDKIAVSMKDQRIVGGAFRLAIDSPRLPFRLIEKFVACRSRILGIPYGDQGIFVRK
AAFQTLEGFRNVPIMEDLDLMRRIRRCKGRIVILDDPVVTSARRWEQEGILYCTLRNWCLVLFFLLGVPPEKLLKFYPSS
RTAPPRAR
>Mature_248_residues
MMMKAISMILPYSVIIPVFRESSCIKDTIRHVLDVAAGAVIEIIVVDGDLSGGTIREIRDIRNGRVRKVLSEKGRGMQLN
RGASLAQGEILLFLHADTRLPEGAFDKIAVSMKDQRIVGGAFRLAIDSPRLPFRLIEKFVACRSRILGIPYGDQGIFVRK
AAFQTLEGFRNVPIMEDLDLMRRIRRCKGRIVILDDPVVTSARRWEQEGILYCTLRNWCLVLFFLLGVPPEKLLKFYPSS
RTAPPRAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28024; Mature: 28024

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMKAISMILPYSVIIPVFRESSCIKDTIRHVLDVAAGAVIEIIVVDGDLSGGTIREIRD
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHH
IRNGRVRKVLSEKGRGMQLNRGASLAQGEILLFLHADTRLPEGAFDKIAVSMKDQRIVGG
HHCCHHHHHHHHCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCHHHEEEECCCCEEECC
AFRLAIDSPRLPFRLIEKFVACRSRILGIPYGDQGIFVRKAAFQTLEGFRNVPIMEDLDL
EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHH
MRRIRRCKGRIVILDDPVVTSARRWEQEGILYCTLRNWCLVLFFLLGVPPEKLLKFYPSS
HHHHHHHCCCEEEECCCCHHHHHHHHHCCEEEEEHHHHHHHHHHHHCCCHHHHHHHCCCC
RTAPPRAR
CCCCCCCC
>Mature Secondary Structure
MMMKAISMILPYSVIIPVFRESSCIKDTIRHVLDVAAGAVIEIIVVDGDLSGGTIREIRD
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHH
IRNGRVRKVLSEKGRGMQLNRGASLAQGEILLFLHADTRLPEGAFDKIAVSMKDQRIVGG
HHCCHHHHHHHHCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCHHHEEEECCCCEEECC
AFRLAIDSPRLPFRLIEKFVACRSRILGIPYGDQGIFVRKAAFQTLEGFRNVPIMEDLDL
EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHH
MRRIRRCKGRIVILDDPVVTSARRWEQEGILYCTLRNWCLVLFFLLGVPPEKLLKFYPSS
HHHHHHHCCCEEEECCCCHHHHHHHHHCCEEEEEHHHHHHHHHHHHCCCHHHHHHHCCCC
RTAPPRAR
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA