Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85860678

Identifier: 85860678

GI number: 85860678

Start: 2854727

End: 2855383

Strand: Direct

Name: 85860678

Synonym: SYN_00237

Alternate gene names: NA

Gene position: 2854727-2855383 (Clockwise)

Preceding gene: 85860677

Following gene: 85860679

Centisome position: 89.79

GC content: 49.16

Gene sequence:

>657_bases
ATGAAAAATGTATCAAGTTTAGCTCGAATGTCTTTGCTCGTCATTATGGTAACGTCAATAGTTCTAGGAATTTACAGCTT
TGCCGCCGCTCACTGTGATACGTTGGATGGGCCGGTCATTCAAGACGCCCGTAAGGCGCTGGAGACCAAAGATGTAACGC
CGATCCTTAAGTGGGTAAAACAAAAAGATGAAAAAGCTGTTCATGCGACCTTTGCCAAGGCGCTGAATGCCAAGGGCAAG
AAAAATGCTGATGCGGCGGAGATAAAATTCTTTGAAACACTTGTCAGGATCCATCGAGCTGGCGAAGGTGCGCCCTTTAC
CGGACTGAAGCCTGCAGGCGAAGTGGAACCAGCCATTGCGGAAGCAGACAAAGCCTTGGCAAGTGGCTCCTCCGATGCAC
TGGTAAGATTGATCACTGATGATGTTGCCGTCGGTATCAAGAGGCGTTATGAGCGTGCAGCGGCCACGTACAAACACAAG
GATGAAAGTGTGGAGCAAGGTCGCGAATTTGTTGAAGCTTACGTAGAGTTTACTCATTATGTGGAACGACTTCATCTCGA
TGCAACCGGCAAGGGAGCGCATGACCAACATAATGAAGGTTCGAAACAGCCTGCCGATGAGCATCATACGTCTGACGTTC
GCAAGCACGGCAAGTAG

Upstream 100 bases:

>100_bases
ATAAGTCTGCATCAGTCCTCACCCATGACCACCTAAGGGTTTACGCCATCGTCACGAGGACGTAATCTTAACAGGAAGCC
TCGAAAGGAGGAACATCACA

Downstream 100 bases:

>100_bases
ACGAACTCTGTTTTTAAAAGGACACTTTATCACTGGTCATGACCGGTGATAAAGTGTCCGGATGAAAGGTTAAAAATGAT
GGAAAGTATAAATCTTAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MKNVSSLARMSLLVIMVTSIVLGIYSFAAAHCDTLDGPVIQDARKALETKDVTPILKWVKQKDEKAVHATFAKALNAKGK
KNADAAEIKFFETLVRIHRAGEGAPFTGLKPAGEVEPAIAEADKALASGSSDALVRLITDDVAVGIKRRYERAAATYKHK
DESVEQGREFVEAYVEFTHYVERLHLDATGKGAHDQHNEGSKQPADEHHTSDVRKHGK

Sequences:

>Translated_218_residues
MKNVSSLARMSLLVIMVTSIVLGIYSFAAAHCDTLDGPVIQDARKALETKDVTPILKWVKQKDEKAVHATFAKALNAKGK
KNADAAEIKFFETLVRIHRAGEGAPFTGLKPAGEVEPAIAEADKALASGSSDALVRLITDDVAVGIKRRYERAAATYKHK
DESVEQGREFVEAYVEFTHYVERLHLDATGKGAHDQHNEGSKQPADEHHTSDVRKHGK
>Mature_218_residues
MKNVSSLARMSLLVIMVTSIVLGIYSFAAAHCDTLDGPVIQDARKALETKDVTPILKWVKQKDEKAVHATFAKALNAKGK
KNADAAEIKFFETLVRIHRAGEGAPFTGLKPAGEVEPAIAEADKALASGSSDALVRLITDDVAVGIKRRYERAAATYKHK
DESVEQGREFVEAYVEFTHYVERLHLDATGKGAHDQHNEGSKQPADEHHTSDVRKHGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23853; Mature: 23853

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNVSSLARMSLLVIMVTSIVLGIYSFAAAHCDTLDGPVIQDARKALETKDVTPILKWVK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHH
QKDEKAVHATFAKALNAKGKKNADAAEIKFFETLVRIHRAGEGAPFTGLKPAGEVEPAIA
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
EADKALASGSSDALVRLITDDVAVGIKRRYERAAATYKHKDESVEQGREFVEAYVEFTHY
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
VERLHLDATGKGAHDQHNEGSKQPADEHHTSDVRKHGK
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKNVSSLARMSLLVIMVTSIVLGIYSFAAAHCDTLDGPVIQDARKALETKDVTPILKWVK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHH
QKDEKAVHATFAKALNAKGKKNADAAEIKFFETLVRIHRAGEGAPFTGLKPAGEVEPAIA
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
EADKALASGSSDALVRLITDDVAVGIKRRYERAAATYKHKDESVEQGREFVEAYVEFTHY
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
VERLHLDATGKGAHDQHNEGSKQPADEHHTSDVRKHGK
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA