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The map label for this gene is 85860498

Identifier: 85860498

GI number: 85860498

Start: 2678967

End: 2679506

Strand: Direct

Name: 85860498

Synonym: SYN_01764

Alternate gene names: NA

Gene position: 2678967-2679506 (Clockwise)

Preceding gene: 85860497

Following gene: 85860515

Centisome position: 84.26

GC content: 59.44

Gene sequence:

>540_bases
ATGCACATTATCATCGACGGCTACAACCTGATCAGGCAATCCGATTTCCTCCGCCATTTTGAACGCCGAAGCCTGGAAGC
CGGGCGGCAGGCTCTGCTTTCGCAGGTTTCCTCATACCGGAAATCGAAGGGGCATCGGATCACGGTGGTGTTCGACGGCT
GGGAAAACGGCTCGCCCTTCGAGGAGCGGGATCGCCAGGGAGGAATTACCGTCGTTTACTCCCGCAGGGGTGAAAAGGCC
GACGAAGTCATCAAACGCATGGTTTTGCAGAAGGGAGAGGAGATCGTCGTCGTGACGTCTGATCGCGATGTCGCTGACTA
CATCTCCAGAAAGGGCGCAACGGCCCTGACTTCTCCGGAGTTCGAAGAGGTGATCGTCCGCGCGGCTGCTTCGGCTGCGG
TGACCGCCGTCGCGGAGCGCTTTCCCGAAAAAGAGGAAGAGGACGATGCCCGCGAATCTGGAAACGCCCGCAAGAAGGGC
CCTGCCCACCGGCTTTCCCGTCGTGAAAAGGCGGCCATGACCCGCCGCAGAAAACTCTAA

Upstream 100 bases:

>100_bases
AGCGGCGATTATGGCCTTACCCTGCCGGCCATGCGCGCCCTGCTGGAAAACAGCCCGGAACCCTGTACATTCCCGACAGC
CTGAACTTTCTTTTCCCGCC

Downstream 100 bases:

>100_bases
TCCGCCTCTAAGTCCCTCCTAAGGGCGGCACACATCGATAAGGAACCGTTCCAGCATCAGGTCGGCATCCTTCGCCGTCG
ACTTCATGGCCAGGTCCATC

Product: cytoplasmic protein

Products: NA

Alternate protein names: Tetracycline Resistance Protein

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MHIIIDGYNLIRQSDFLRHFERRSLEAGRQALLSQVSSYRKSKGHRITVVFDGWENGSPFEERDRQGGITVVYSRRGEKA
DEVIKRMVLQKGEEIVVVTSDRDVADYISRKGATALTSPEFEEVIVRAAASAAVTAVAERFPEKEEEDDARESGNARKKG
PAHRLSRREKAAMTRRRKL

Sequences:

>Translated_179_residues
MHIIIDGYNLIRQSDFLRHFERRSLEAGRQALLSQVSSYRKSKGHRITVVFDGWENGSPFEERDRQGGITVVYSRRGEKA
DEVIKRMVLQKGEEIVVVTSDRDVADYISRKGATALTSPEFEEVIVRAAASAAVTAVAERFPEKEEEDDARESGNARKKG
PAHRLSRREKAAMTRRRKL
>Mature_179_residues
MHIIIDGYNLIRQSDFLRHFERRSLEAGRQALLSQVSSYRKSKGHRITVVFDGWENGSPFEERDRQGGITVVYSRRGEKA
DEVIKRMVLQKGEEIVVVTSDRDVADYISRKGATALTSPEFEEVIVRAAASAAVTAVAERFPEKEEEDDARESGNARKKG
PAHRLSRREKAAMTRRRKL

Specific function: Unknown

COG id: COG3688

COG function: function code R; Predicted RNA-binding protein containing a PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20344; Mature: 20344

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIIIDGYNLIRQSDFLRHFERRSLEAGRQALLSQVSSYRKSKGHRITVVFDGWENGSPF
CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCH
EERDRQGGITVVYSRRGEKADEVIKRMVLQKGEEIVVVTSDRDVADYISRKGATALTSPE
HHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCCCCCCH
FEEVIVRAAASAAVTAVAERFPEKEEEDDARESGNARKKGPAHRLSRREKAAMTRRRKL
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHIIIDGYNLIRQSDFLRHFERRSLEAGRQALLSQVSSYRKSKGHRITVVFDGWENGSPF
CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCH
EERDRQGGITVVYSRRGEKADEVIKRMVLQKGEEIVVVTSDRDVADYISRKGATALTSPE
HHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCCCCCCH
FEEVIVRAAASAAVTAVAERFPEKEEEDDARESGNARKKGPAHRLSRREKAAMTRRRKL
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA